RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SOWAHDA6NJG2 315 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 EIF3CLB5ME19 914 aaKnown RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 PRPSAP2O60256 369 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 LILRB5O75023 590 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 MOCS3O95396 460 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 APBB3O95704 486 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 ASLP04424 464 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 HOXB2P14652 356 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 TCF4P15884 667 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 RHOQP17081 205 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 IL1R2P27930 398 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 NBL1P41271 181 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 MAGEA1P43355 309 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 PXNP49023 591 aaPredicted RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 FNTBP49356 437 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 TCEAL1Q15170 157 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 CA9Q16790 459 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 BOLA3Q53S33 107 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 C6orf118Q5T5N4 469 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 DAB2IPQ5VWQ8 1189 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 RNF219Q5W0B1 726 aaPredicted RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 HEATR6Q6AI08 1181 aaKnown RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 KIAA1211LQ6NV74 962 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 TFAP2DQ7Z6R9 452 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 NLRP14Q86W24 1093 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 LONP2Q86WA8 852 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 RASSF3Q86WH2 238 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 TMEM139Q8IV31 216 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 PSTKQ8IV42 348 aaKnown RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 TSTD1Q8NFU3 115 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 SLC35G2Q8TBE7 412 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 ATRIPQ8WXE1 791 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 TBC1D31Q96DN5 1066 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 MYO19Q96H55 970 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 MRGPRX3Q96LB0 322 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 EIF3CQ99613 913 aaKnown RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 SNRNP25Q9BV90 132 aaKnown RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 OSGEPQ9NPF4 335 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 AP4E1Q9UPM8 1137 aa10□□□□□ -0.81
LINC00339-210ENST00000635675 EPN1Q9Y6I3 576 aaPredicted RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 MUC22E2RYF6 1773 aaPredicted RBP10□□□□□ -0.81
LINC00339-210ENST00000635675 A0A0D9SEW6 157 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ILVBLA1L0T0 632 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 MTA2O94776 668 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PROSCO94903 275 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 NDUFA10O95299 355 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RHOCP08134 193 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 SRPRAP08240 638 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PRKCHP24723 683 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 OR1E1P30953 314 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 HTR7P34969 479 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CYLC1P35663 651 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CTSOP43234 321 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ECT2LQ008S8 904 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 SULT2A1Q06520 285 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ANO7Q6IWH7 933 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RWDD4Q6NW29 188 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 SERPINA13PQ6UXR4 307 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RAD9BQ6WBX8 426 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF783Q6ZMS7 281 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 WDR5BQ86VZ2 330 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RHOT2Q8IXI1 618 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 KDM1BQ8NB78 822 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RFFLQ8WZ73 363 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PDLIM2Q96JY6 352 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 BAG1Q99933 345 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 DHX35Q9H5Z1 703 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 POLMQ9NP87 494 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 NDFIP2Q9NV92 336 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 FAM86C1Q9NVL1 165 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 TMEM248Q9NWD8 314 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 GPATCH2LQ9NWQ4 482 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 LCMT1Q9UIC8 334 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 SLCO3A1Q9UIG8 710 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 VPS28Q9UK41 221 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ERVW-1Q9UQF0 538 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PCDHA13Q9Y5I0 950 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RAD54BQ9Y620 910 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 R4GN57 208 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CKAP5Q14008 2032 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 TCRBV21S2A2A0A5A6 115 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 WASH4PA8MWX3 477 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 PROB1E7EW31 1015 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 AXIN1O15169 862 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 HRO43593 1189 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CREB3O43889 395 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ALDH1A2O94788 518 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 RARAP10276 462 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 HLA-EP13747 358 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 GABRG2P18507 467 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 EPHB2P29323 1055 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 ARHGAP25P42331 645 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 HCAR3P49019 387 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 MAPKAPK2P49137 400 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 NUMBP49757 651 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 SLC25A11Q02978 314 aaKnown RBP9.99□□□□□ -0.81
LINC00339-210ENST00000635675 GNA12Q03113 381 aa9.99□□□□□ -0.81
LINC00339-210ENST00000635675 CAMK2GQ13555 558 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms