RNA–Protein interactions for RNA: ENST00000629650.2

PPM1D-204, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1D, humanhuman

TSL 5 BASIC

Gene PPM1D, Length 1,525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1D-204ENST00000629650 MAPKAPK2P49137 400 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 SLC7A5Q01650 507 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 B4GALNT4Q76KP1 1039 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 CHST9Q7L1S5 443 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 GSTA5Q7RTV2 222 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 CDKL3Q8IVW4 592 aaPredicted RBP20.24■□□□□ 0.83
PPM1D-204ENST00000629650 UMODL1-AS1Q8N2C9 162 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 POMKQ9H5K3 350 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 CD320Q9NPF0 282 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 DOCK8Q8NF50 2099 aa20.24■□□□□ 0.83
PPM1D-204ENST00000629650 NYNRINQ9P2P1 1898 aaKnown RBP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 MUC3AQ02505 3323 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 HACD1B0YJ81 288 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 SGK1O00141 431 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 CTIFO43310 598 aaKnown RBP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 TBL1XO60907 577 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 CLDN11O75508 207 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 MX2P20592 715 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 GBP2P32456 591 aaPredicted RBP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 NDST2P52849 883 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 GALNT2Q10471 571 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 NAA30Q147X3 362 aaPredicted RBP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 PPP1R7Q15435 360 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 MPPE1Q53F39 396 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 SLC45A4Q5BKX6 768 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 JAMLQ86YT9 394 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 ALLCQ8N6M5 410 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 CCNYQ8ND76 341 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 LRRN4Q8WUT4 740 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 TFB1MQ8WVM0 346 aaKnown RBP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 RSAD2Q8WXG1 361 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 RSPRY1Q96DX4 576 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 NECTIN4Q96NY8 510 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 QKIQ96PU8 341 aaKnown RBP eCLIP20.23■□□□□ 0.83
PPM1D-204ENST00000629650 MYADMQ96S97 322 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 SLC39A8Q9C0K1 460 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 SHROOM3Q8TF72 1996 aa20.23■□□□□ 0.83
PPM1D-204ENST00000629650 BCLAF3A2AJT9 711 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 FAM187AA6NFU0 413 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 DFFAO00273 331 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 SLC9A3R1O14745 358 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 SMAD4Q13485 552 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 KCTD19Q17RG1 926 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 AFMIDQ63HM1 303 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 TPGS1Q6ZTW0 290 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 ARHGAP12Q8IWW6 846 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 DDI1Q8WTU0 396 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 OTUB2Q96DC9 234 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 LGMNQ99538 433 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 TRIM51Q9BSJ1 452 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 EPC1Q9H2F5 836 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 NOL6Q9H6R4 1146 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 TRPV4Q9HBA0 871 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 CFAP69A5D8W1 941 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 HEXIM1O94992 359 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 CYBBP04839 570 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 RBL1P28749 1068 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 GARSP41250 739 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 AP1B1Q10567 949 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 ZNF177Q13360 481 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 SYDE1Q6ZW31 735 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 KIAA1958Q8N8K9 716 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 BPIFB1Q8TDL5 484 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 BHMTQ93088 406 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 HDAC11Q96DB2 347 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 LRRC3BQ96PB8 259 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 BRD8Q9H0E9 1235 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 LINC00597Q9H2U6 94 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 OBP2AQ9NY56 170 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 DMGDHQ9UI17 866 aaKnown RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 FAM50BQ9Y247 325 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 USP15Q9Y4E8 981 aaPredicted RBP20.22■□□□□ 0.83
PPM1D-204ENST00000629650 WNT6Q9Y6F9 365 aa20.22■□□□□ 0.83
PPM1D-204ENST00000629650 KCNN4O15554 427 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 RAMP2O60895 175 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 LAMP2P13473 410 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 FCARP24071 287 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 STIP1P31948 543 aaKnown RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 GDF10P55107 478 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 PPIDQ08752 370 aaKnown RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 PRKD1Q15139 912 aaPredicted RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 ELF2Q15723 593 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 SMAD2Q15796 467 aaKnown RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 MPP7Q5T2T1 576 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 C6orf118Q5T5N4 469 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 HEATR6Q6AI08 1181 aaKnown RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 CARNMT1Q8N4J0 409 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 ATPAF2Q8N5M1 289 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 FAM71DQ8N9W8 422 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 HINFPQ9BQA5 517 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 RAB17Q9H0T7 212 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 ANKZF1Q9H8Y5 726 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 ZFP14Q9HCL3 533 aa20.21■□□□□ 0.83
PPM1D-204ENST00000629650 UTP11Q9Y3A2 253 aaKnown RBP20.21■□□□□ 0.83
PPM1D-204ENST00000629650 CHD5Q8TDI0 1954 aa20.2■□□□□ 0.82
PPM1D-204ENST00000629650 UQCRHLA0A096LP55 91 aa20.2■□□□□ 0.82
PPM1D-204ENST00000629650 TARSL2A2RTX5 802 aaKnown RBP20.2■□□□□ 0.82
PPM1D-204ENST00000629650 HEPACAM2A8MVW5 462 aa20.2■□□□□ 0.82
PPM1D-204ENST00000629650 RASA4BC9J798 803 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms