RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SV2CQ496J9 727 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC157Q569K6 752 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC122Q5T0U0 273 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EMC10Q5UCC4 262 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF572Q7Z3I7 529 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM150AQ86TG1 271 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 FAM35AQ86V20 835 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MON1AQ86VX9 555 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 SFTPA1Q8IWL2 248 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ALLCQ8N6M5 410 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 OR2I1PQ8NGU4 316 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ATP2A3Q93084 1043 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ACDQ96AP0 544 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EEF2KMTQ96G04 330 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TIPINQ9BVW5 301 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TSGA10Q9BZW7 698 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PDE11AQ9HCR9 933 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TMEM9BQ9NQ34 198 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ZNHIT6Q9NWK9 470 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ARHGAP20Q9P2F6 1191 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 APEX2Q9UBZ4 518 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ADAM30Q9UKF2 790 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MAFFQ9ULX9 164 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 GUCA1BQ9UMX6 200 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 L1RE1Q9UN81 338 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TFR2Q9UP52 801 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 STARD13Q9Y3M8 1113 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PIEZO2Q9H5I5 2752 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PES1O00541 588 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PIRO00625 290 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TRDMT1O14717 391 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 KRT86O43790 486 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 BDNFP23560 247 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 OAS2P29728 719 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PTGER3P43115 390 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 RAP1GAPP47736 663 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EPHB1P54762 984 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 VSNL1P62760 191 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 RPL10AP62906 217 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 PDGFRLQ15198 375 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 KYAT1Q16773 422 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 C20orf204Q6ZNR8 217 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 CACUL1Q86Y37 369 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 TXNDC5Q8NBS9 432 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MDGA1Q8NFP4 955 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 EXOC4Q96A65 974 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ZNF560Q96MR9 790 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 FGFBP2Q9BYJ0 223 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 MTMR12Q9C0I1 747 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 INTS7Q9NVH2 962 aaKnown RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 RBAKQ9NYW8 714 aaPredicted RBP5.07□□□□□ -1.6
LINC00550-201ENST00000629293 ODF2LQ9ULJ1 636 aa5.07□□□□□ -1.6
LINC00550-201ENST00000629293 HECTD1Q9ULT8 2610 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 BCLAF3A2AJT9 711 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 H3BQF6 201 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PJA2O43164 708 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KATNA1O75449 491 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KLF8O95600 359 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PLEKP08567 350 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 IRF1P10914 325 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NFKB2Q00653 900 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CYP4F3Q08477 520 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 MESP2Q0VG99 397 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KCNMA1Q12791 1236 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ZC3H12AQ5D1E8 599 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 FAM26FQ5R3K3 315 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KIAA1328Q86T90 577 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ADGRF2Q8IZF7 708 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CAMKK1Q8N5S9 505 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 GTPBP3Q969Y2 492 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NACA2Q9H009 215 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KCTD10Q9H3F6 313 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ASB7Q9H672 318 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 OBP2AQ9NY56 170 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PTPRQQ9UMZ3 2332 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SAR1BQ9Y6B6 198 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ITPR1Q14643 2758 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KIF26AQ9ULI4 1882 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CCDC163A0A0D9SF12 145 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SSU72P8A0A1W2PR75 194 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TARSL2A2RTX5 802 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TBC1D3BA6NDS4 549 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 FAM189A1O60320 539 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 NOL4O94818 638 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PAPSS2O95340 614 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 DLATP10515 647 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ANXA13P27216 316 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 KIF11P52732 1056 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 FBXO43Q4G163 708 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SLFN12LQ6IEE8 588 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SYT13Q7L8C5 426 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 CD302Q8IX05 232 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ZCCHC14Q8WYQ9 949 aaKnown RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 SYN2Q92777 582 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 EZH1Q92800 747 aaPredicted RBP5.06□□□□□ -1.6
LINC00550-201ENST00000629293 ELMO3Q96BJ8 720 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 LOXL4Q96JB6 756 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 PKNOX2Q96KN3 472 aa5.06□□□□□ -1.6
LINC00550-201ENST00000629293 TSG101Q99816 390 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms