RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 NEK3P51956 506 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 RPL10AP62906 217 aaKnown RBP22.58■■□□□ 1.21
PNKP-220ENST00000627232 SPANXN3Q5MJ09 141 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 RTP2Q5QGT7 225 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 SLC39A5Q6ZMH5 540 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 ATPAF2Q8N5M1 289 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 TTC9BQ8N6N2 239 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 RTL3Q8N8U3 475 aaKnown RBP22.58■■□□□ 1.21
PNKP-220ENST00000627232 TCP10LQ8TDR4 215 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 CDKL2Q92772 493 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 B3GALT6Q96L58 329 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 TOX2Q96NM4 488 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 PLCD4Q9BRC7 762 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.58■■□□□ 1.21
PNKP-220ENST00000627232 SYBUQ9NX95 663 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 NUDT5Q9UKK9 219 aa22.58■■□□□ 1.21
PNKP-220ENST00000627232 ARHGAP42A6NI28 874 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 LPXNO60711 386 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 VNN2O95498 520 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 JCHAINP01591 159 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 DNAJB2P25686 324 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 CCNFP41002 786 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 ARPP19P56211 112 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 NIPAL4Q0D2K0 466 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 FRG1Q14331 258 aaKnown RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 CRYMQ14894 314 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 TRIP4Q15650 581 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 ACBD5Q5T8D3 534 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 RNF187Q5TA31 235 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 SPATA21Q7Z572 469 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 ATP6V0D2Q8N8Y2 350 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 STKLD1Q8NE28 680 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 LRRC8CQ8TDW0 803 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 CEP295NLQ96MC4 621 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 AGAP3Q96P47 875 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 PPP1R2P1Q96PQ5 205 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 MLPHQ9BV36 600 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 RNF208Q9H0X6 261 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 VPS11Q9H270 941 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 KDM4CQ9H3R0 1056 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 LRRC40Q9H9A6 602 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 MKS1Q9NXB0 559 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 BFARQ9NZS9 450 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 HCSTQ9UBK5 93 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 GRID1Q9ULK0 1009 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 DOCK4Q8N1I0 1966 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 CCT8L1PA6NM43 557 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 DFFAO00273 331 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 EFEMP2O95967 443 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 POLBP06746 335 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 PYGBP11216 843 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 NPY2RP49146 381 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 DNAJC3Q13217 504 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 TIGD7Q6NT04 549 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 RSPO2Q6UXX9 243 aaPredicted RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 RNF19BQ6ZMZ0 732 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 TIFABQ6ZNK6 161 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 OR52K1Q8NGK4 314 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 IL12RB2Q99665 862 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 TRIM56Q9BRZ2 755 aaKnown RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 PITPNM3Q9BZ71 974 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 SLC39A8Q9C0K1 460 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 DONSONQ9NYP3 566 aa22.57■■□□□ 1.2
PNKP-220ENST00000627232 PPARGC1AQ9UBK2 798 aaKnown RBP22.57■■□□□ 1.2
PNKP-220ENST00000627232 NYNRINQ9P2P1 1898 aaKnown RBP22.56■■□□□ 1.2
PNKP-220ENST00000627232 ANKRD65E5RJM6 399 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 GOLGA8RI6L899 631 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 MATN3O15232 486 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 MOCS2O96007 188 aaPredicted RBP22.56■■□□□ 1.2
PNKP-220ENST00000627232 DHRS4L1P0CG22 281 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 CCL23P55773 120 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 MTA1Q13330 715 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 MGAT5BQ3V5L5 792 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 LACTB2Q53H82 288 aaPredicted RBP22.56■■□□□ 1.2
PNKP-220ENST00000627232 PIK3R6Q5UE93 754 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 C14orf80Q86SX3 495 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 LINC00523Q86TU6 105 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 ZNF683Q8IZ20 524 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 CCT6BQ92526 530 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 KLF6Q99612 283 aaPredicted RBP22.56■■□□□ 1.2
PNKP-220ENST00000627232 STARD13Q9Y3M8 1113 aa22.56■■□□□ 1.2
PNKP-220ENST00000627232 MAGEB16A2A368 324 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 NT5C1B-RDH14C9J2C7 533 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 UGT1A9O60656 530 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 MAFKO60675 156 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 CCNB1P14635 433 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 ADRA1DP25100 572 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 CRADDP78560 199 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 EFEMP1Q12805 493 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 TAF10Q12962 218 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 ZKSCAN8Q15776 578 aaPredicted RBP22.55■■□□□ 1.2
PNKP-220ENST00000627232 NAPEPLDQ6IQ20 393 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 BCL7CQ8WUZ0 217 aaPredicted RBP22.55■■□□□ 1.2
PNKP-220ENST00000627232 SEPT5Q99719 369 aaPredicted RBP22.55■■□□□ 1.2
PNKP-220ENST00000627232 ACTR5Q9H9F9 607 aaPredicted RBP22.55■■□□□ 1.2
PNKP-220ENST00000627232 UGT1A7Q9HAW7 530 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 UGT1A10Q9HAW8 530 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 UGT1A8Q9HAW9 530 aa22.55■■□□□ 1.2
PNKP-220ENST00000627232 PRDM5Q9NQX1 630 aaPredicted RBP22.55■■□□□ 1.2
PNKP-220ENST00000627232 PRKAG3Q9UGI9 489 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms