RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 ZSCAN23Q3MJ62 389 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 SYCP2LQ5T4T6 812 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 ACAD10Q6JQN1 1059 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 LUZP1Q86V48 1076 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 RXFP2Q8WXD0 754 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 CENPIQ92674 756 aaPredicted RBP23.01■■□□□ 1.27
SF1-220ENST00000626028 FEM1AQ9BSK4 669 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 SELENOOQ9BVL4 669 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 SLC6A17Q9H1V8 727 aa23.01■■□□□ 1.27
SF1-220ENST00000626028 RSPH9Q9H1X1 276 aaPredicted RBP23.01■■□□□ 1.27
SF1-220ENST00000626028 SEPT11Q9NVA2 429 aaKnown RBP23.01■■□□□ 1.27
SF1-220ENST00000626028 NUMA1Q14980 2115 aa23■■□□□ 1.27
SF1-220ENST00000626028 EDDM13A0A1B0GTR0 161 aa23■■□□□ 1.27
SF1-220ENST00000626028 ANKRD62A6NC57 917 aa23■■□□□ 1.27
SF1-220ENST00000626028 LRRC53A6NM62 1247 aa23■■□□□ 1.27
SF1-220ENST00000626028 I6L893 689 aaPredicted RBP23■■□□□ 1.27
SF1-220ENST00000626028 RNASEH1O60930 286 aaKnown RBP23■■□□□ 1.27
SF1-220ENST00000626028 PRKCIP41743 596 aa23■■□□□ 1.27
SF1-220ENST00000626028 CCDC14Q49A88 953 aa23■■□□□ 1.27
SF1-220ENST00000626028 ZNF776Q68DI1 518 aaPredicted RBP23■■□□□ 1.27
SF1-220ENST00000626028 SLC23A3Q6PIS1 610 aa23■■□□□ 1.27
SF1-220ENST00000626028 APCDD1Q8J025 514 aa23■■□□□ 1.27
SF1-220ENST00000626028 EMC1Q8N766 993 aa23■■□□□ 1.27
SF1-220ENST00000626028 PIGKQ92643 395 aa23■■□□□ 1.27
SF1-220ENST00000626028 TTYH3Q9C0H2 523 aa23■■□□□ 1.27
SF1-220ENST00000626028 ANLNQ9NQW6 1124 aa23■■□□□ 1.27
SF1-220ENST00000626028 PPARGC1AQ9UBK2 798 aaKnown RBP23■■□□□ 1.27
SF1-220ENST00000626028 DNTTP04053 509 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 TNFAIP3P21580 790 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 ATXN1P54253 815 aaKnown RBP22.99■■□□□ 1.27
SF1-220ENST00000626028 FANCCQ00597 558 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 CCDC6Q16204 474 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 TTC31Q49AM3 519 aaPredicted RBP22.99■■□□□ 1.27
SF1-220ENST00000626028 WDR45BQ5MNZ6 344 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 SFMBT2Q5VUG0 894 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 ZNF783Q6ZMS7 281 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 USP30Q70CQ3 517 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 DGLUCYQ7Z3D6 616 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 C14orf80Q86SX3 495 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 CIR1Q86X95 450 aaPredicted RBP22.99■■□□□ 1.27
SF1-220ENST00000626028 ALG14Q96F25 216 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 TOE1Q96GM8 510 aaKnown RBP22.99■■□□□ 1.27
SF1-220ENST00000626028 SUSD2Q9UGT4 822 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 OR51B4Q9Y5P0 310 aa22.99■■□□□ 1.27
SF1-220ENST00000626028 ADAMTS9Q9P2N4 1935 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 CNOT1A5YKK6 2376 aaKnown RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 A0A1W2PQJ5 194 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 TCRBV5S1A1TA0A578 114 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 LNP1A1A4G5 178 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 E9PAM4 449 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 GZMAP12544 262 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 DESP17661 470 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 ITPKAP23677 461 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 MZF1P28698 734 aaPredicted RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 RFC1P35251 1148 aaPredicted RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 ADRA1BP35368 520 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 UBASH3AP57075 661 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 RPS14P62263 151 aaKnown RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 ATP11AP98196 1134 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 ASIC2Q16515 512 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 DUOXA1Q1HG43 343 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 C6orf118Q5T5N4 469 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 C9orf64Q5T6V5 341 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 FAM131BQ86XD5 332 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 JOSD2Q8TAC2 188 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 DNASE2BQ8WZ79 361 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 SYN2Q92777 582 aaPredicted RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 ERLEC1Q96DZ1 483 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 C2orf49Q9BVC5 232 aaPredicted RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 NUSAP1Q9BXS6 441 aaKnown RBP22.98■■□□□ 1.27
SF1-220ENST00000626028 OSBPL2Q9H1P3 480 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 SLC25A13Q9UJS0 675 aa22.98■■□□□ 1.27
SF1-220ENST00000626028 CXorf51AA0A1B0GTR3 108 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 GDF9O60383 454 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 GPD1P21695 349 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 AIF1P55008 147 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 KRT83P78385 493 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 ELAVL3Q14576 367 aaKnown RBP22.97■■□□□ 1.27
SF1-220ENST00000626028 STPG1Q5TH74 334 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 DNAJC24Q6P3W2 148 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 LRSAM1Q6UWE0 723 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 SLC41A1Q8IVJ1 513 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 MCOLN2Q8IZK6 566 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 ZNF366Q8N895 744 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 NTAN1Q96AB6 310 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 HSPA12BQ96MM6 686 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 VPS28Q9UK41 221 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 BZW2Q9Y6E2 419 aaKnown RBP22.97■■□□□ 1.27
SF1-220ENST00000626028 PCDH15Q96QU1 1955 aa22.97■■□□□ 1.27
SF1-220ENST00000626028 SIN3BO75182 1162 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 SERPINF2P08697 491 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 PBX1P40424 430 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 CTSOP43234 321 aaPredicted RBP22.96■■□□□ 1.27
SF1-220ENST00000626028 IRAK1P51617 712 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 ZNF143P52747 638 aaPredicted RBP22.96■■□□□ 1.27
SF1-220ENST00000626028 SCAPQ12770 1279 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 C15orf59Q2T9L4 293 aaPredicted RBP22.96■■□□□ 1.27
SF1-220ENST00000626028 ALFQ53S48 1182 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 TRIM61Q5EBN2 209 aa22.96■■□□□ 1.27
SF1-220ENST00000626028 PPP1R15BQ5SWA1 713 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms