RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ABCB4P21439 1286 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SDHBP21912 280 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 NTSR1P30989 418 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SCNN1AP37088 669 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 WASP42768 502 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 KIR2DL1P43626 348 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 RPL34P49207 117 aaKnown RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 CDK17Q00537 523 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 RING1Q06587 406 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 MESP2Q0VG99 397 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 HYAL2Q12891 473 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 PDCLQ13371 301 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 STARD3Q14849 445 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 DRAP1Q14919 205 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 KRT31Q15323 416 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 ADGRF1Q5T601 910 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 FYB2Q5VWT5 728 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 OR6B2Q6IFH4 312 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 MSANTD2Q6P1R3 559 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 C11orf57Q6ZUT1 292 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 TOGARAM2Q6ZUX3 1019 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 BEND5Q7L4P6 421 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 BHLHA9Q7RTU4 235 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 ANKS1BQ7Z6G8 1248 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SLC47A2Q86VL8 602 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 FAM71AQ8IYT1 594 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 ZNF557Q8N988 423 aaPredicted RBP6.64□□□□□ -1.35
TCF4-249ENST00000625716 TMEM35BQ8NCS4 154 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 AZIN2Q96A70 460 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 LOXL4Q96JB6 756 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SPAG5Q96R06 1193 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 STK33Q9BYT3 514 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 TPSD1Q9BZJ3 242 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 CIPCQ9C0C6 399 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 LACRTQ9GZZ8 138 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 FAM204AQ9H8W3 233 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SIX2Q9NPC8 291 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 ZDHHC4Q9NPG8 344 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 NAALADL1Q9UQQ1 740 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 TLR6Q9Y2C9 796 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 MYO16Q9Y6X6 1858 aa6.64□□□□□ -1.35
TCF4-249ENST00000625716 SYNJ2BP-COX16A0A087WUM0 186 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 PRR5-ARHGAP8B1AHC4 643 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 GFRA2O00451 464 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 PAPSS1O43252 624 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 ACSL4O60488 711 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 SYNCRIPO60506 623 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 TBL1XO60907 577 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 HSF2BPO75031 334 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 LRP3O75074 770 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 TRUB2O95900 331 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 MOCS2O96007 188 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 GLI1P08151 1106 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 CISD3P0C7P0 127 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 PNMA6AP0CW24 399 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 F5P12259 2224 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 CYP11B1P15538 503 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 FSTP19883 344 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 PTMSP20962 102 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 HOXC13P31276 330 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ID4P47928 161 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 COPB1P53618 953 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 POLR2FP61218 127 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 TPM4P67936 248 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ARHGAP8P85298 464 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 SLC6A3Q01959 620 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 LMNB2Q03252 620 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 UBXN1Q04323 297 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 MTA1Q13330 715 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 EIF4HQ15056 248 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 SYCP1Q15431 976 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 FILIP1LQ4L180 1135 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 DCAF6Q58WW2 860 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 TTC39BQ5VTQ0 682 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 CDKAL1Q5VV42 579 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 TAF3Q5VWG9 929 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 EGFLAMQ63HQ2 1017 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 CAVIN1Q6NZI2 390 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 SND1Q7KZF4 910 aaKnown RBP eCLIP6.63□□□□□ -1.35
TCF4-249ENST00000625716 KBTBD6Q86V97 674 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ATCAYQ86WG3 371 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ERICH1Q86X53 443 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ZNF677Q86XU0 584 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ZDHHC17Q8IUH5 632 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 MFN1Q8IWA4 741 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 SFTPA1Q8IWL2 248 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 FAM217AQ8IXS0 508 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 CACTIN-AS1Q8N1I8 211 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ATP6V0D2Q8N8Y2 350 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 C12orf50Q8NA57 414 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 HJURPQ8NCD3 748 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 C1orf131Q8NDD1 294 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 MDGA1Q8NFP4 955 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 NEK11Q8NG66 645 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 DQX1Q8TE96 717 aaKnown RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 WFIKKN2Q8TEU8 576 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 ARRDC1-AS1Q9H2J1 176 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 PLCB1Q9NQ66 1216 aa6.63□□□□□ -1.35
TCF4-249ENST00000625716 FAM207AQ9NSI2 230 aaPredicted RBP6.63□□□□□ -1.35
TCF4-249ENST00000625716 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms