RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 ZCWPW2A0A1B0GU75 182 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 B2RBV5 119 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TNPO2O14787 897 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 SRGAP2BP0DMP2 458 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 NFKB1P19838 968 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 GARSP41250 739 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 HCAR3P49019 387 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 KDSRQ06136 332 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SPANXN3Q5MJ09 141 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TEDDM1Q5T9Z0 273 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 KCTD11Q693B1 232 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 C17orf99Q6UX52 265 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 STRA8Q7Z7C7 330 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TMEM135Q86UB9 458 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TAC4Q86UU9 113 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TNS4Q8IZW8 715 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 DCLK2Q8N568 766 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 WDR60Q8WVS4 1066 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SENP6Q9GZR1 1112 aaPredicted RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 CHRAC1Q9NRG0 131 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TMLHEQ9NVH6 421 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CCDC78A2IDD5 438 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 GOLGA8TH3BQL2 631 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 NCAM2O15394 837 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 JCHAINP01591 159 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ARRB2P32121 409 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SLC1A6P48664 564 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CXCR3P49682 368 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ZNF157P51786 506 aaPredicted RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 UBAP2LQ14157 1087 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 KPNB1Q14974 876 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 DLG2Q15700 870 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 STXBP5Q5T5C0 1151 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 PLD6Q8N2A8 252 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 TEX9Q8N6V9 391 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.24□□□□□ -0.45
TP53-227ENST00000622645 SCAMP5Q8TAC9 235 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 PIWIL2Q8TC59 973 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 RNF34Q969K3 372 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 HDAC11Q96DB2 347 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 TMEM209Q96SK2 561 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 EPAS1Q99814 870 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CPNE1Q99829 537 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SIK2Q9H0K1 926 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 GBA3Q9H227 469 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CAB39LQ9H9S4 337 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SNX15Q9NRS6 342 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 PRR5-ARHGAP8B1AHC4 643 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 DUSP11O75319 330 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 F9P00740 461 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 IGHA2P01877 340 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 PROCP04070 461 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 PCSK1P29120 753 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 CTGFP29279 349 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ARHGAP8P85298 464 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 GALNT2Q10471 571 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 NAB1Q13506 487 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ANKRD20A4Q4UJ75 823 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ACSBG2Q5FVE4 666 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 FAM91A1Q658Y4 838 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 FSTL4Q6MZW2 842 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 LRRTM3Q86VH5 581 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 ENDOVQ8N8Q3 282 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 USP33Q8TEY7 942 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 MTG1Q9BT17 334 aaPredicted RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 CSNK1G1Q9HCP0 422 aa12.24□□□□□ -0.45
TP53-227ENST00000622645 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.24□□□□□ -0.45
TP53-227ENST00000622645 ARHGAP42A6NI28 874 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 MGEA5O60502 916 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 MX2P20592 715 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CDC25CP30307 473 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CD52P31358 61 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CCNG1P51959 295 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 GRTP1Q5TC63 336 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RWDD4Q6NW29 188 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 ARHGAP36Q6ZRI8 547 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 OTOP3Q7RTS5 596 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RSPH3Q86UC2 560 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 WDR75Q8IWA0 830 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 RBM15BQ8NDT2 890 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 ACVR1CQ8NER5 493 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RBBP8Q99708 897 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CCDC106Q9BWC9 280 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CHST12Q9NRB3 414 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 PNPOQ9NVS9 261 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 COPG2Q9UBF2 871 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RPL26L1Q9UNX3 145 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 GIT1Q9Y2X7 761 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 F8W810 466 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 RPL9P32969 192 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 PTDSS1P48651 473 aaKnown RBP12.23□□□□□ -0.45
TP53-227ENST00000622645 ITGA9Q13797 1035 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 CNTD1Q8N815 330 aa12.23□□□□□ -0.45
TP53-227ENST00000622645 OR10T2Q8NGX3 314 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms