RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 NEU3Q9UQ49 428 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 CDY2AQ9Y6F7 541 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 NLRC5Q86WI3 1866 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 ZBTB24O43167 697 aaPredicted RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 ITM2AO43736 263 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 IGLV3-25P01717 112 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 IBSPP21815 317 aaPredicted RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 PCSK1P29120 753 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 RGS2P41220 211 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SLC1A6P48664 564 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 HARS2P49590 506 aaKnown RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 CDK7P50613 346 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 ZBTB17Q13105 803 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 CCDC153Q494R4 210 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 C16orf46Q6P387 395 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 ZCCHC23Q6ZST2 131 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 CLEC14AQ86T13 490 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SORT1Q99523 831 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 EPAS1Q99814 870 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 BATF3Q9NR55 127 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SNX15Q9NRS6 342 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.65□□□□□ -0.86
PDPN-212ENST00000621990 MIOSQ9NXC5 875 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 BFARQ9NZS9 450 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 PPARGC1AQ9UBK2 798 aaKnown RBP9.65□□□□□ -0.86
PDPN-212ENST00000621990 TAGLN3Q9UI15 199 aa9.65□□□□□ -0.86
PDPN-212ENST00000621990 M0QZ92 97 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 DUSP11O75319 330 aaKnown RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 CELF2O95319 508 aaKnown RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 CYP11A1P05108 521 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 SERPINB6P35237 376 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 NPY2RP49146 381 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 SERPINB8P50452 374 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 RABGGTBP53611 331 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 RPL10AP62906 217 aaKnown RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 PDE1BQ01064 536 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MGAT3Q09327 533 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 OLIG2Q13516 323 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ANKRD20A4Q4UJ75 823 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ACSBG2Q5FVE4 666 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 BSPRYQ5W0U4 402 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ITPRIPL1Q6GPH6 555 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 DCLRE1AQ6PJP8 1040 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 C17orf99Q6UX52 265 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ATG14Q6ZNE5 492 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 WDR75Q8IWA0 830 aaKnown RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 ARHGAP24Q8N264 748 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 SOCS4Q8WXH5 440 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MCUR1Q96AQ8 359 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TEKT5Q96M29 485 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ACBD6Q9BR61 282 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 OSBPL2Q9H1P3 480 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 FAM96AQ9H5X1 160 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TXNDC16Q9P2K2 825 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MARCOQ9UEW3 520 aaPredicted RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 OR12D3Q9UGF7 316 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MYADML2A6NDP7 307 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 F8W8V4 182 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 AP3B1O00203 1094 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ZNF195O14628 629 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 CHRNA1P02708 482 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 KITP10721 976 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MYL4P12829 197 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 AKR1A1P14550 325 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 DNAJB2P25686 324 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 ARRB2P32121 409 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 SPRP35270 261 aaPredicted RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 PPM1JQ5JR12 505 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 AGMOQ6ZNB7 445 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MAVSQ7Z434 540 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 SERINC5Q86VE9 423 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 C10orf107Q8IVU9 208 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 DCLK2Q8N568 766 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 MYLPFQ96A32 169 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TSGA13Q96PP4 275 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 EBF4Q9BQW3 602 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 IL22Q9GZX6 179 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TKTL2Q9H0I9 626 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 WDCPQ9H6R7 721 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 DNAJC28Q9NX36 388 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TMEM216Q9P0N5 145 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 TIMM13Q9Y5L4 95 aaPredicted RBP9.64□□□□□ -0.87
PDPN-212ENST00000621990 SHROOM3Q8TF72 1996 aa9.64□□□□□ -0.87
PDPN-212ENST00000621990 LIN7AO14910 233 aaPredicted RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 ZNF623O75123 536 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 LRIG2O94898 1065 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 MPOP05164 745 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 TYK2P29597 1187 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 CYP2C18P33260 490 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 CSE1LP55060 971 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 NKX3-2P78367 333 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 KPNB1Q14974 876 aaKnown RBP9.63□□□□□ -0.87
PDPN-212ENST00000621990 DNAL1Q4LDG9 190 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 TIGD5Q53EQ6 642 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 ARTNQ5T4W7 220 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 FSTL4Q6MZW2 842 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 CES3Q6UWW8 571 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 STRA8Q7Z7C7 330 aa9.63□□□□□ -0.87
PDPN-212ENST00000621990 TAC4Q86UU9 113 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms