RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RGS20O76081 388 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 EGFRP00533 1210 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SUPT20HL2P0C7V6 817 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CXCL8P10145 99 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CPA3P15088 417 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SLC5A2P31639 672 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 MYBPC1Q00872 1141 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TUBB3Q13509 450 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 HNRNPDQ14103 355 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 DUS1LQ6P1R4 473 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 KCNT2Q6UVM3 1135 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NIPA1Q7RTP0 329 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RAB44Q7Z6P3 723 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CPNE9Q8IYJ1 553 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 OR6P1Q8NGX9 317 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PCDH19Q8TAB3 1148 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ACTRT2Q8TDY3 377 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NCSTNQ92542 709 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SIGLEC10Q96LC7 697 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 GMLQ99445 158 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PKP2Q99959 881 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 LPIN3Q9BQK8 851 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PCDHAC1Q9H158 963 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 C1orf21Q9H246 121 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 BFARQ9NZS9 450 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 THEGQ9P2T0 379 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 EMCNQ9ULC0 261 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NFASCO94856 1347 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CHADO15335 359 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TPST1O60507 370 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CCNT2O60583 730 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PLA2G6O60733 806 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SPAG6O75602 509 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ITGB3P05106 788 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CCR3P51677 355 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 ABCE1P61221 599 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TAP1Q03518 808 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SLC10A2Q12908 348 aaPredicted RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PCLAFQ15004 111 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 FSCBQ5H9T9 825 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TRNP1Q6NT89 227 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 METTL7BQ6UX53 244 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NAPRTQ6XQN6 538 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 IFNEQ86WN2 208 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 RIOX2Q8IUF8 465 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 LILRA2Q8N149 483 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 DIS3LQ8TF46 1054 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 TRAPPC12Q8WVT3 735 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 KCNK16Q96T55 309 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NPAS2Q99743 824 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 NRDE2Q9H7Z3 1164 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 IPO11Q9UI26 975 aaKnown RBP7.11□□□□□ -1.27
NEDD9-216ENST00000620854 PPME1Q9Y570 386 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 SNX13Q9Y5W8 968 aa7.11□□□□□ -1.27
NEDD9-216ENST00000620854 CITO14578 2027 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 MICAL2O94851 1124 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 LSM8O95777 96 aaKnown RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 MOCS2O96007 188 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 GSRP00390 522 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 C1QAP02745 245 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 LTFP02788 710 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SERPINE1P05121 402 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 FAM58BPP0C7Q3 252 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SETSIPP0DME0 302 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 LCP1P13796 627 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 ARSAP15289 507 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PTPN1P18031 435 aaKnown RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 AVPR1AP37288 418 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 YWHAHQ04917 246 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TMEM132BQ14DG7 1078 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 AMHR2Q16671 573 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 IER5Q5VY09 327 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 KBTBD6Q86V97 674 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 VSIG10LQ86VR7 867 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 DSELQ8IZU8 1212 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SORT1Q99523 831 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SIKE1Q9BRV8 207 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 TCF7L2Q9NQB0 619 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PRKAG2Q9UGJ0 569 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 KCNK1O00180 336 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 ZSCAN9O15535 394 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 USP2O75604 605 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 HDCP19113 662 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 GPD1P21695 349 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 MPSTP25325 297 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 EEF1DP29692 281 aaKnown RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 ZNF132P52740 706 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 CDC42EP1Q00587 391 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 IRF9Q00978 393 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 CAPSQ13938 189 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 STILQ15468 1287 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 SLC9A4Q6AI14 798 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 EFCAB12Q6NXP0 572 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PGM2L1Q6PCE3 622 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 ARMCX2Q7L311 632 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PYROXD2Q8N2H3 581 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 RIN3Q8TB24 985 aa7.1□□□□□ -1.27
NEDD9-216ENST00000620854 PDCD6IPQ8WUM4 868 aaKnown RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 DACT3Q96B18 629 aaPredicted RBP7.1□□□□□ -1.27
NEDD9-216ENST00000620854 AGAP2Q99490 1192 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms