RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 PM20D1Q6GTS8 502 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 YTHDF3Q7Z739 585 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 TTC13Q8NBP0 860 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 EPS8L3Q8TE67 593 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 CPT1BQ92523 772 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 LGMNQ99538 433 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 CEP41Q9BYV8 373 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 TMEM39AQ9NV64 488 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 STAP1Q9ULZ2 295 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 USP3Q9Y6I4 520 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 A0A0B4J203 849 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 HPDP32754 393 aaPredicted RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 ADRA1BP35368 520 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 POLE2P56282 527 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 BASP1P80723 227 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 ROR1Q01973 937 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 MTMR3Q13615 1198 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 LRRC26Q2I0M4 334 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 KRT71Q3SY84 523 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 RNASEH2BQ5TBB1 312 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 DENND2CQ68D51 928 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 NCBP2-AS2Q69YL0 99 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 FIP1L1Q6UN15 594 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 SCD5Q86SK9 330 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 TAC4Q86UU9 113 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 GRAMD2AQ8IUY3 354 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 GDAP1Q8TB36 358 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 CCDC110Q8TBZ0 833 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 ZNF333Q96JL9 665 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 SPACA7Q96KW9 195 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 RBM15Q96T37 977 aaKnown RBP eCLIP11.68□□□□□ -0.54
TP53-226ENST00000620739 ZNF670Q9BS34 389 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 COLEC11Q9BWP8 271 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 ELAC1Q9H777 363 aaKnown RBP11.68□□□□□ -0.54
TP53-226ENST00000620739 TMBIM4Q9HC24 238 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 PCDH9Q9HC56 1237 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 DTLQ9NZJ0 730 aa11.68□□□□□ -0.54
TP53-226ENST00000620739 TRAPPC3O43617 180 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 FBXO21O94952 628 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 MYZAPP0CAP1 466 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 KLC1Q07866 573 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 FUT10Q6P4F1 479 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 KCNT2Q6UVM3 1135 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 NDUFAF2Q8N183 169 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 RNF139Q8WU17 664 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 TKTL2Q9H0I9 626 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 RABEP2Q9H5N1 569 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 PRDM5Q9NQX1 630 aaPredicted RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 ARHGEF4Q9NR80 690 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 ATAD3AQ9NVI7 634 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 XPO7Q9UIA9 1087 aaKnown RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 TMEM189-UBE2V1I3L0A0 370 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 AVILO75366 819 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 TMEM63AO94886 807 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 ACRP10323 421 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 CSF2RAP15509 400 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 FNBP1LQ5T0N5 605 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 ANKMY2Q8IV38 441 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 APLFQ8IW19 511 aaPredicted RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 KIAA1958Q8N8K9 716 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 ASIC4Q96FT7 647 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 OSBPL1AQ9BXW6 950 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 SIK2Q9H0K1 926 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 WDCPQ9H6R7 721 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 NINJ2Q9NZG7 142 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 CTNNAL1Q9UBT7 734 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 TBK1Q9UHD2 729 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 FBXW11Q9UKB1 542 aa11.67□□□□□ -0.54
TP53-226ENST00000620739 NOVA2Q9UNW9 492 aaKnown RBP11.67□□□□□ -0.54
TP53-226ENST00000620739 MFSD11O43934 449 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 VNN2O95498 520 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 ANP32DO95626 131 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 TBX18O95935 607 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 CXCL10P02778 98 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 HNRNPCP07910 306 aaKnown RBP eCLIP11.66□□□□□ -0.54
TP53-226ENST00000620739 COL6A1P12109 1028 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 CPB1P15086 417 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 GBP1P32455 592 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 IFI35P80217 286 aaPredicted RBP11.66□□□□□ -0.54
TP53-226ENST00000620739 DEFB103AP81534 67 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 MAPRE1Q15691 268 aaKnown RBP11.66□□□□□ -0.54
TP53-226ENST00000620739 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 LINC00469Q8N7U9 141 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 DQX1Q8TE96 717 aaKnown RBP11.66□□□□□ -0.54
TP53-226ENST00000620739 ANKRD49Q8WVL7 239 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 PRCCQ92733 491 aaPredicted RBP11.66□□□□□ -0.54
TP53-226ENST00000620739 CASP10Q92851 521 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 ATP6V1G3Q96LB4 118 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 SAYSD1Q9NPB0 183 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 TBX21Q9UL17 535 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 C5orf42Q9H799 3197 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 XIRP2A4UGR9 3374 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 A0A1W2PQH9 124 aa11.66□□□□□ -0.54
TP53-226ENST00000620739 TTC34A8MYJ7 566 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms