RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ADH5P11766 374 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 KRT3P12035 628 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PDGFRAP16234 1089 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ABCB4P21439 1286 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 MAGEA1P43355 309 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PTPN9P43378 593 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SLC11A2P49281 568 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SULT1E1P49888 294 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 HDAC4P56524 1084 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 RPS24P62847 133 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ARHGAP8P85298 464 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ATP11AP98196 1134 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SFSWAPQ12872 951 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 MTAPQ13126 283 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 GAS6Q14393 721 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SLC18A3Q16572 532 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ZSCAN26Q16670 478 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SLC25A52Q3SY17 297 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 EOGTQ5NDL2 527 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ADGRF1Q5T601 910 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC181Q5TID7 509 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM72AQ5TYM5 149 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 TTC39BQ5VTQ0 682 aaPredicted RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FYB2Q5VWT5 728 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 LAIR1Q6GTX8 287 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SDE2Q6IQ49 451 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM72DQ6L9T8 149 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FSTL4Q6MZW2 842 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 DNAJC24Q6P3W2 148 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 RFWD3Q6PCD5 774 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 METTL3Q86U44 580 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 WDR5BQ86VZ2 330 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM72BQ86X60 149 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM131BQ86XD5 332 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ETFBKMTQ8IXQ9 262 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 IFT20Q8IY31 132 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 CCDC185Q8N715 623 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 NAT16Q8N8M0 369 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ACRBPQ8NEB7 543 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 UCMAQ8WVF2 138 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 BHMTQ93088 406 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PGAP3Q96FM1 320 aaPredicted RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 VCPIP1Q96JH7 1222 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ZC3H10Q96K80 434 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 LMLNQ96KR4 655 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PRICKLE1Q96MT3 831 aaPredicted RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SERPINB11Q96P15 392 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 MCEEQ96PE7 176 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PEBP4Q96S96 227 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 DESI2Q9BSY9 194 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SELENOOQ9BVL4 669 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 THAP2Q9H0W7 228 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FAM204AQ9H8W3 233 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 RBM12Q9NTZ6 932 aaKnown RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 POLR3BQ9NW08 1133 aaPredicted RBP5.42□□□□□ -1.54
SHMT1-211ENST00000618902 GPATCH2LQ9NWQ4 482 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 C2orf42Q9NWW7 574 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 ARHGEF38Q9NXL2 777 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 PLK2Q9NYY3 685 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SALL4Q9UJQ4 1053 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 FBXO10Q9UK96 956 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SNX12Q9UMY4 172 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 SLC8A2Q9UPR5 921 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 TLR6Q9Y2C9 796 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 HYOU1Q9Y4L1 999 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 CACNA1EQ15878 2313 aa5.42□□□□□ -1.54
SHMT1-211ENST00000618902 KNL1Q8NG31 2342 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ASPMQ8IZT6 3477 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 SPTBN2O15020 2390 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PRR23AA6NEV1 266 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 H0Y858 1186 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CAPN9O14815 690 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 FANCGO15287 622 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 GFRA3O60609 400 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF217O75362 1048 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PAGE1O75459 146 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 SASH3O75995 380 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 APBB3O95704 486 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 EGFP01133 1207 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PENKP01210 267 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 RETP07949 1114 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 H2AFZP0C0S5 128 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CISD3P0C7P0 127 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 TDGF1P13385 188 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 HNRNPLP14866 589 aaKnown RBP eCLIP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 DESP17661 470 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 GPD1P21695 349 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 IL1R2P27930 398 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 GBP1P32455 592 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 GALK1P51570 392 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ZNF143P52747 638 aaPredicted RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 HNRNPH2P55795 449 aaKnown RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CSTF1Q05048 431 aaKnown RBP5.41□□□□□ -1.54
SHMT1-211ENST00000618902 ZBTB16Q05516 673 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 NME3Q13232 169 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 SLC12A1Q13621 1099 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 DMC1Q14565 340 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 PON2Q15165 354 aa5.41□□□□□ -1.54
SHMT1-211ENST00000618902 CA9Q16790 459 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms