RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 SPDYCQ5MJ68 293 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FAM72AQ5TYM5 149 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 LAIR1Q6GTX8 287 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ANO7Q6IWH7 933 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FAM72DQ6L9T8 149 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ALKBH5Q6P6C2 394 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 DCUN1D2Q6PH85 259 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 TMC6Q7Z403 805 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 SLFN11Q7Z7L1 901 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ALYREFQ86V81 257 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 C11orf74Q86VG3 221 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FAM72BQ86X60 149 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 PSTKQ8IV42 348 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 CNGA4Q8IV77 575 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 TC2NQ8N9U0 490 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FRS2Q8WU20 508 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 CYB5D2Q8WUJ1 264 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 MRGPRX1Q96LB2 322 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 DCBLD2Q96PD2 775 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 PSMB7Q99436 277 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ACE2Q9BYF1 805 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 CIPCQ9C0C6 399 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ZYG11BQ9C0D3 744 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 MKRN2Q9H000 416 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 SIK2Q9H0K1 926 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 THAP2Q9H0W7 228 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 DUSP15Q9H1R2 295 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 FBRSQ9HAH7 460 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 MRPL47Q9HD33 250 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 USP36Q9P275 1121 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 MBD1Q9UIS9 605 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 FZD10Q9ULW2 581 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 PLA2G4CQ9UP65 541 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 SMG5Q9UPR3 1016 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 ERVW-1Q9UQF0 538 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 RAD54BQ9Y620 910 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 CHD5Q8TDI0 1954 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 EP300Q09472 2414 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 ILVBLA1L0T0 632 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 TARSL2A2RTX5 802 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 EIF3CLB5ME19 914 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 AKR1B15C9JRZ8 316 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 ATP9BO43861 1147 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 LRP3O75074 770 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 LRCH4O75427 683 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ZMPSTE24O75844 475 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 LCA5LO95447 670 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 RETP07949 1114 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 RHOQP17081 205 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 HTR7P34969 479 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 WASP42768 502 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 CTSOP43234 321 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 MAPKAPK2P49137 400 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 GALCP54803 685 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ECT2LQ008S8 904 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 GFPT1Q06210 699 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 SULT2A1Q06520 285 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ZNF177Q13360 481 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 SIM2Q14190 667 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 HNRNPA1L2Q32P51 320 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 PLK5Q496M5 336 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 USP39Q53GS9 565 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 TDRD12Q587J7 1177 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 C6orf118Q5T5N4 469 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 C9orf64Q5T6V5 341 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 HEATR6Q6AI08 1181 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 LRRC31Q6UY01 552 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 KBTBD6Q86V97 674 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 CCDC117Q8IWD4 279 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 FAM160A2Q8N612 972 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 OR2T3Q8NH03 318 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 FAM71BQ8TC56 605 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 RUBCNQ92622 972 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 PTPRN2Q92932 1015 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 FAM131CQ96AQ9 280 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ARHGEF26Q96DR7 871 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 PEBP4Q96S96 227 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 PPP1R9BQ96SB3 815 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 EIF3CQ99613 913 aaKnown RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 CHP1Q99653 195 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 NCAPGQ9BPX3 1015 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.48□□□□□ -1.05
NEK3-209ENST00000618856 TRIM5Q9C035 493 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 RSPH9Q9H1X1 276 aaPredicted RBP8.48□□□□□ -1.05
NEK3-209ENST00000618856 PRSS16Q9NQE7 514 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 ITM2CQ9NQX7 267 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 NDFIP2Q9NV92 336 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 TMEM248Q9NWD8 314 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 MPP6Q9NZW5 540 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 SUN2Q9UH99 717 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 SLCO3A1Q9UIG8 710 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 HS3ST2Q9Y278 367 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 FAM186AA6NE01 2351 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 DCHS1Q96JQ0 3298 aa8.48□□□□□ -1.05
NEK3-209ENST00000618856 IGHV1OR15-9A0A0B4J2B8 117 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 A0A0D9SEW6 157 aa8.47□□□□□ -1.05
NEK3-209ENST00000618856 DCLK1O15075 740 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms