RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZSWIM2Q8NEG5 633 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 TMIEQ8NEW7 156 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SLC2A14Q8TDB8 520 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 FRS2Q8WU20 508 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ZNF516Q92618 1163 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 OMDQ99983 421 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 AGPAT3Q9NRZ7 376 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SERGEFQ9UGK8 458 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 RASAL2Q9UJF2 1139 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CLEC4EQ9ULY5 219 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 FREM2Q5SZK8 3169 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 BSNQ9UPA5 3926 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 PCSK5Q92824 1860 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 C1QTNF3-AMACRE9PGA6 284 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 KCNK3O14649 394 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 GCNT3O95395 438 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 MOCS3O95396 460 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ASS1P00966 412 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 THEGLP0DJG4 465 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 SLC8A1P32418 973 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 HOXD13P35453 343 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 RECQLP46063 649 aaPredicted RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 RABIFP47224 123 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 RPL34P49207 117 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 MYL6P60660 151 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 PPP2CBP62714 309 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 PPP2CAP67775 309 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ZFP36L1Q07352 338 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 TRPC3Q13507 836 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 STAT4Q14765 748 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ZNF284Q2VY69 593 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ZACNQ401N2 412 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 C4orf17Q53FE4 359 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 C6orf132Q5T0Z8 1188 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 LAYNQ6UX15 382 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 SV2BQ7L1I2 683 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 C14orf80Q86SX3 495 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 CBWD2Q8IUF1 395 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 XXYLT1Q8NBI6 393 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ZNF548Q8NEK5 533 aaPredicted RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 DDI1Q8WTU0 396 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 HEXIM2Q96MH2 286 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 DPYSL5Q9BPU6 564 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 EFHD1Q9BUP0 239 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 TRIM62Q9BVG3 475 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 EPN3Q9H201 632 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ABCB8Q9NUT2 735 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 DMAC2Q9NW81 257 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 A0A1W2PP55 124 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 WIPF3A6NGB9 483 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 XPO1O14980 1071 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 VNN1O95497 513 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 TBX18O95935 607 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 HOXB1P14653 301 aaPredicted RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 TGM2P21980 687 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 GTF2H1P32780 548 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 UGT1A5P35504 534 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ATP1A2P50993 1020 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 CASP5P51878 434 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 MAP3K7CLP57077 242 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 SQSTM1Q13501 440 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 C5orf22Q49AR2 442 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 FAM133BQ5BKY9 247 aaKnown RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 PITRM1Q5JRX3 1037 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 MANEAQ5SRI9 462 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ACBD5Q5T8D3 534 aaPredicted RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 CCDC73Q6ZRK6 1079 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 ATCAYQ86WG3 371 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 HPS6Q86YV9 775 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 SYCP3Q8IZU3 236 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 FSTL5Q8N475 847 aaPredicted RBP4.74□□□□□ -1.65
SNCA-213ENST00000618500 ATXN7L3BQ96GX2 97 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 PPP1R9BQ96SB3 815 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 DDA1Q9BW61 102 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 APPL1Q9UKG1 709 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 PPM1HQ9ULR3 514 aa4.74□□□□□ -1.65
SNCA-213ENST00000618500 TMEM110-MUSTN1A8MSY1 372 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 PLD2O14939 933 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 TGFB1I1O43294 461 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 RNASEH2AO75792 299 aaKnown RBP4.73□□□□□ -1.65
SNCA-213ENST00000618500 TNFSF15O95150 251 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 CCDC130P13994 396 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 ELAVL4P26378 380 aaKnown RBP4.73□□□□□ -1.65
SNCA-213ENST00000618500 SLC5A2P31639 672 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 SLC11A2P49281 568 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 NDST1P52848 882 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 NCOA4Q13772 614 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 CLCA4Q14CN2 919 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 C3orf38Q5JPI3 329 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 PIP5KL1Q5T9C9 394 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 SV2AQ7L0J3 742 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 EFL1Q7Z2Z2 1120 aaKnown RBP4.73□□□□□ -1.65
SNCA-213ENST00000618500 PARGQ86W56 976 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 HORMAD1Q86X24 394 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 DENND1CQ8IV53 801 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 FAM184AQ8NB25 1140 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 SORCS1Q8WY21 1168 aa4.73□□□□□ -1.65
SNCA-213ENST00000618500 OR8D1Q8WZ84 308 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms