RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 CCDC28BQ9BUN5 200 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 ENAMQ9NRM1 1142 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 TAS2R14Q9NYV8 317 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 MALT1Q9UDY8 824 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 ADAM28Q9UKQ2 775 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 YBX2Q9Y2T7 364 aaKnown RBP12.37□□□□□ -0.43
SRRT-216ENST00000618262 MICAL3Q7RTP6 2002 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 TANC1Q9C0D5 1861 aa12.37□□□□□ -0.43
SRRT-216ENST00000618262 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 GMNCA6NCL1 334 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ATMINO43313 823 aaPredicted RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 ABCB4P21439 1286 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 C21orf58P58505 322 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TMPRSS15P98073 1019 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 CUL1Q13616 776 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SPCS2Q15005 226 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TMEM95Q3KNT9 176 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ZNF704Q6ZNC4 412 aaPredicted RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 ZNF571Q7Z3V5 609 aaPredicted RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 ANKMY2Q8IV38 441 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TTC16Q8NEE8 873 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 EXD1Q8NHP7 514 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.36□□□□□ -0.43
SRRT-216ENST00000618262 PER2O15055 1255 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ADAM12O43184 909 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 EIF2S1P05198 315 aaKnown RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 SOX5P35711 763 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 CASP2P42575 452 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 DSC1Q08554 894 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 DCTN2Q13561 401 aaKnown RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 RSPO2Q6UXX9 243 aaPredicted RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 RAD9BQ6WBX8 426 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SPATA18Q8TC71 538 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 DNAJC9Q8WXX5 260 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 FAM136AQ96C01 138 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TMEM169Q96HH4 297 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 VN1R3Q9BXE9 311 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 STK33Q9BYT3 514 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 RWDD3Q9Y3V2 267 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 MACROD2A1Z1Q3 448 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 CCT8L1PA6NM43 557 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TNFRSF10BO14763 440 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SULT1B1O43704 296 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 AGR2O95994 175 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ACO1P21399 889 aaKnown RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 GNA15P30679 374 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 STAT1P42224 750 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 RGS7P49802 495 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 CCR3P51677 355 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SMARCB1Q12824 385 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SV2CQ496J9 727 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 MDH1BQ5I0G3 518 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 FUT10Q6P4F1 479 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TTC23LQ6PF05 361 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SPATA24Q86W54 205 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TTC9BQ8N6N2 239 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ANKRD53Q8N9V6 530 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 OR10T2Q8NGX3 314 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 PMEPA1Q969W9 287 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ZNF560Q96MR9 790 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 PBX4Q9BYU1 374 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 PPANQ9NQ55 473 aaKnown RBP12.36□□□□□ -0.43
SRRT-216ENST00000618262 KANSL3Q9P2N6 904 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 TJP2Q9UDY2 1190 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 SLC8A2Q9UPR5 921 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 DNAJC16Q9Y2G8 782 aa12.36□□□□□ -0.43
SRRT-216ENST00000618262 ZSCAN5BA6NJL1 495 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 MCF2LO15068 1137 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 ICMTO60725 284 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 WFS1O76024 890 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 GJB6O95452 261 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 GNAZP19086 355 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 SOX11P35716 441 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 CBLBQ13191 982 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 NNTQ13423 1086 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 IRF2BP2Q7Z5L9 587 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 CNGA4Q8IV77 575 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 FEZF2Q8TBJ5 459 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 UCMAQ8WVF2 138 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 NKX2-4Q9H2Z4 354 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 ELAC1Q9H777 363 aaKnown RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 NHEJ1Q9H9Q4 299 aaPredicted RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 MRPL40Q9NQ50 206 aaKnown RBP12.35□□□□□ -0.43
SRRT-216ENST00000618262 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 ADAM22Q9P0K1 906 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 RNF112Q9ULX5 631 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 LRCH1Q9Y2L9 728 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 INSL6Q9Y581 213 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 PCDHGA8Q9Y5G5 932 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 C17orf113A0A1B0GUU1 675 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 CYP17A1P05093 508 aa12.35□□□□□ -0.43
SRRT-216ENST00000618262 ABCB1P08183 1280 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms