RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 VN1R3Q9BXE9 311 aa17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 SSU72Q9NP77 194 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 TLR8Q9NR97 1041 aaKnown RBP17.76■□□□□ 0.43
PCDHGC3-205ENST00000617641 ARHGAP42A6NI28 874 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 PSMD5Q16401 504 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 C10orf120Q5SQS8 335 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 NUGGCQ68CJ6 796 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 ITPRIPL1Q6GPH6 555 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 MICALCLQ6ZW33 695 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 PIGWQ7Z7B1 504 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 SPATS2Q86XZ4 545 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 CNTD1Q8N815 330 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 TOX2Q96NM4 488 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 VAT1Q99536 393 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 NSRP1Q9H0G5 558 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 C12orf65Q9H3J6 166 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 CWH43Q9H720 699 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 CLIC5Q9NZA1 410 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 VANGL2Q9ULK5 521 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 TRIM49D1C9J1S8 452 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 HMBSP08397 361 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC2A3P11169 496 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 ATF6P18850 670 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 NRG1Q02297 640 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 SMARCB1Q12824 385 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 IKBKEQ14164 716 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 TTC39BQ5VTQ0 682 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 KCTD11Q693B1 232 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 C6orf89Q6UWU4 347 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 LZTR1Q8N653 840 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 RTL3Q8N8U3 475 aaKnown RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 BANPQ8N9N5 519 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 OXNAD1Q96HP4 312 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 CRISPLD2Q9H0B8 497 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 MOCS1Q9NZB8 636 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 UBP1Q9NZI7 540 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 MARCH2Q9P0N8 246 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 SAMD15Q9P1V8 674 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZNF180Q9UJW8 692 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 GGA2Q9UJY4 613 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 TBX21Q9UL17 535 aa17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 MAGED2Q9UNF1 606 aaPredicted RBP17.75■□□□□ 0.43
PCDHGC3-205ENST00000617641 C2CD2LO14523 706 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 SUN1O94901 812 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 PGAM1P18669 254 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 TAC1P20366 129 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 CCNCP24863 283 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 LVRNQ6Q4G3 990 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 OTOP3Q7RTS5 596 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZNF419Q96HQ0 510 aaPredicted RBP17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 CABS1Q96KC9 395 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 C1orf74Q96LT6 269 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 TSGA13Q96PP4 275 aa17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 MKI67P46013 3256 aaKnown RBP17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 NYNRINQ9P2P1 1898 aaKnown RBP17.74■□□□□ 0.43
PCDHGC3-205ENST00000617641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 MAFKO60675 156 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZWINTO95229 277 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 EFEMP2O95967 443 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 PYGBP11216 843 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CCNB1P14635 433 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 OR1D2P34982 312 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 PSEN1P49768 467 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 RPL10AP62906 217 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZNF33AQ06730 810 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 BMPR2Q13873 1038 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CRYMQ14894 314 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 TRIP4Q15650 581 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SMAD1Q15797 465 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 USP41Q3LFD5 358 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 MS4A13Q5J8X5 152 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 HHATQ5VTY9 493 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CNKSR3Q6P9H4 555 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 TMCO2Q7Z6W1 182 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 ZNF683Q8IZ20 524 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CCDC197Q8NCU1 140 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 TCP10LQ8TDR4 215 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 C2orf15Q8WU43 125 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 APOL2Q9BQE5 337 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CCSER2Q9H7U1 834 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 TMEM39AQ9NV64 488 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC17A6Q9P2U8 582 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 MTRRQ9UBK8 725 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC12A8A0AV02 714 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC38A8A6NNN8 435 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SNRPAP09012 282 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 CES3Q6UWW8 571 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SH2D5Q6ZV89 423 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SPOCK2Q92563 424 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 ALKBH8Q96BT7 664 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 IGSF21Q96ID5 467 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 OXCT2Q9BYC2 517 aaPredicted RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 OLA1Q9NTK5 396 aaKnown RBP17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 SLC17A7Q9P2U7 560 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 COL4A6Q14031 1691 aa17.73■□□□□ 0.43
PCDHGC3-205ENST00000617641 KRT37O76014 449 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 ALDH1A2O94788 518 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 ADRA1DP25100 572 aa17.72■□□□□ 0.43
PCDHGC3-205ENST00000617641 AFMIDQ63HM1 303 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms