RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TK2O00142 265 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GJB6O95452 261 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ALOX5P09917 674 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 FLT3P36888 993 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC11A2P49281 568 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SQLEQ14534 574 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 C11orf88Q6PI97 169 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 C3orf67Q6ZVT6 689 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 OTOP1Q7RTM1 612 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 BPIFB6Q8NFQ5 453 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 KAT5Q92993 513 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 VAT1Q99536 393 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC4A5Q9BY07 1137 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 PTPRHQ9HD43 1115 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ADPRHL2Q9NX46 363 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 CRNNQ9UBG3 495 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ADAM28Q9UKQ2 775 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 PSMD13Q9UNM6 376 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 MTF2Q9Y483 593 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 A8MUI8 341 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 IL6P05231 212 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GLRA2P23416 452 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 CCR1P32246 355 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 PPP3CAQ08209 521 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 INO80DQ53TQ3 878 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 DNAJC14Q6Y2X3 702 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 IRF2BP2Q7Z5L9 587 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ALYREFQ86V81 257 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 DPP10Q8N608 796 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GLIS3Q8NEA6 775 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ADCY4Q8NFM4 1077 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ASZ1Q8WWH4 475 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 FHDC1Q9C0D6 1143 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 AGO4Q9HCK5 861 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 A0A087X1B8 175 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 HMGCRP04035 888 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 LYNP07948 512 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 CTSHP09668 335 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ERVK-10P10266 1014 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ODC1P11926 461 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 GALK1P51570 392 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MAMLD1Q13495 774 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 USP39Q53GS9 565 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MARC1Q5VT66 337 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 FOXR2Q6PJQ5 311 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 GLB1LQ6UWU2 654 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 TTC30AQ86WT1 665 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ECHDC2Q86YB7 292 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 FITM2Q8N6M3 262 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 GMCL1P1Q8NEA9 526 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ACER1Q8TDN7 264 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MRPL48Q96GC5 212 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNRF3Q9ULT6 936 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 PLA2G4CQ9UP65 541 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MYL12BO14950 172 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MYL12AP19105 171 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 HALP42357 657 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 CLCN3P51790 818 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 SPIRE1Q08AE8 756 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 MZT2BQ6NZ67 158 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 EPHX4Q8IUS5 362 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM71AQ8IYT1 594 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ADGRF2Q8IZF7 708 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 TMEM132CQ8N3T6 1108 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RASGEF1CQ8N431 466 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 KLHL23Q8NBE8 558 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 PSMA8Q8TAA3 256 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 UBXN6Q9BZV1 441 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 REEP1Q9H902 201 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 SAE1Q9UBE0 346 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 PRR5-ARHGAP8B1AHC4 643 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM86B1E9PN63 330 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 F5H5T6 163 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 S100A1P23297 94 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 LPIN1Q14693 890 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ZIK1Q3SY52 487 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP2W1Q8TAV3 490 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ALG3Q92685 438 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 TSEN34Q9BSV6 310 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 S100A14Q9HCY8 104 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 KLK14Q9P0G3 267 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 INVSQ9Y283 1065 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RAP2CQ9Y3L5 183 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 CSDE1O75534 798 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RENBPP51606 427 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 NDST1P52848 882 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 BNIP2Q12982 314 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF484Q5JVG2 852 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 NEK10Q6ZWH5 1172 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 AMIGO2Q86SJ2 522 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 KBTBD8Q8NFY9 601 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RCN3Q96D15 328 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 PWWP2AQ96N64 755 aa10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 RTFDC1Q9BY42 306 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-209ENST00000617103 PRDM16Q9HAZ2 1276 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms