RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 ROPN1Q9HAT0 212 aaPredicted RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 ALG13Q9NP73 1137 aaKnown RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 TLR8Q9NR97 1041 aaKnown RBP7.99□□□□□ -1.13
NEK3-207ENST00000617054 SMYD2Q9NRG4 433 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 MTRRQ9UBK8 725 aa7.99□□□□□ -1.13
NEK3-207ENST00000617054 E7ESA3 106 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 GOLGA8TH3BQL2 631 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 J3KR12 359 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SHOX2O60902 331 aaPredicted RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 CDH16O75309 829 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TCF3P15923 654 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 MAGEA11P43364 429 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 MMP13P45452 471 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 GLUD2P49448 558 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 MAXP61244 160 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ELAVL2Q12926 359 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 PLD1Q13393 1074 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SLC8B1Q6J4K2 584 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 FBXL22Q6P050 247 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 BZW1Q7L1Q6 419 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 NECAB2Q7Z6G3 386 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ARHGAP12Q8IWW6 846 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 PPM1NQ8N819 430 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ATP11CQ8NB49 1132 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ZNF461Q8TAF7 563 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 MAML1Q92585 1016 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 BADQ92934 168 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SIGLEC10Q96LC7 697 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ZNF558Q96NG5 402 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TLR6Q9Y2C9 796 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TANC1Q9C0D5 1861 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 LCHNA4D1U4 455 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 NRG2O14511 850 aaPredicted RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 ATP9BO43861 1147 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 CCT5P48643 541 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 PAPOLAP51003 745 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 HNRNPH2P55795 449 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 C1QTNF8P60827 252 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 PPIDQ08752 370 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 PPP2R5DQ14738 602 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TAF12Q16514 161 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TNFAIP8L3Q5GJ75 292 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 UNC5AQ6ZN44 842 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SCML4Q8N228 414 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ATP2A3Q93084 1043 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SLC39A13Q96H72 371 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SLC22A12Q96S37 553 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 HAPLN3Q96S86 360 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TMEM109Q9BVC6 243 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 OSBPL2Q9H1P3 480 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 INTS9Q9NV88 658 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 RSPH14Q9UHP6 348 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 COL4A6Q14031 1691 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ARHGAP42A6NI28 874 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 HACD1B0YJ81 288 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 PRRG1O14668 218 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TSPAN3O60637 253 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SOD2P04179 222 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 GJA1P17302 382 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ETFBP38117 255 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 AIF1P55008 147 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 GEMIN4P57678 1058 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 TWF1Q12792 350 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SEMA5AQ13591 1074 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 BMPR2Q13873 1038 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 CERCAMQ5T4B2 595 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 C1orf53Q5VUE5 145 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 NADSYN1Q6IA69 706 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 MFSD5Q6N075 450 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 DENND1CQ8IV53 801 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 SLC39A11Q8N1S5 342 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 PNPLA1Q8N8W4 532 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 DNAAF3Q8N9W5 541 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ZSCAN18Q8TBC5 510 aaPredicted RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 TBC1D31Q96DN5 1066 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 TTC25Q96NG3 672 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 RPRD1AQ96P16 312 aaPredicted RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 NOL6Q9H6R4 1146 aaKnown RBP7.98□□□□□ -1.13
NEK3-207ENST00000617054 SYBUQ9NX95 663 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 EURLQ9NYK6 297 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 IL37Q9NZH6 218 aa7.98□□□□□ -1.13
NEK3-207ENST00000617054 ABHD14A-ACY1A0A1B0GW23 586 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 E2F8A0AVK6 867 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TEX28O15482 410 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 COCHO43405 550 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 MAFKO60675 156 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 EFEMP2O95967 443 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 CPP00450 1065 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 CCNB1P14635 433 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 HMGA1P17096 107 aaKnown RBP7.97□□□□□ -1.13
NEK3-207ENST00000617054 KRT4P19013 534 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 GMPRP36959 345 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 HCAR3P49019 387 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 GALNT2Q10471 571 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 TEX44Q53QW1 395 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 BRMS1LQ5PSV4 323 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 SPNS2Q8IVW8 549 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ATPAF2Q8N5M1 289 aa7.97□□□□□ -1.13
NEK3-207ENST00000617054 ARMC5Q96C12 935 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms