RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 NOL3O60936 208 aaKnown RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 SUPT3HO75486 399 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 POLD3Q15054 466 aaPredicted RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 MAPRE2Q15555 327 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 SUGP1Q8IWZ8 645 aaKnown RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 CRYBG2Q8N1P7 616 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 POU5F2Q8N7G0 328 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 CDC26Q8NHZ8 85 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 PIWIL1Q96J94 861 aaKnown RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 MRPL1Q9BYD6 325 aaKnown RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 NMRAL1Q9HBL8 299 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 CYTH4Q9UIA0 394 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 DNM1LO00429 736 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 MSI1O43347 362 aaKnown RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 F2P00734 622 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 ITGA2BP08514 1039 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 IQCF3P0C7M6 154 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 L1CAMP32004 1257 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 RAD51Q06609 339 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 INCA1Q0VD86 236 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 TBCCQ15814 346 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 RBBP7Q16576 425 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 CCDC153Q494R4 210 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 SMPD4Q9NXE4 827 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 MPP6Q9NZW5 540 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 RCOR3Q9P2K3 495 aaPredicted RBP13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 KIF3CO14782 793 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 METTL18O95568 372 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 PYGLP06737 847 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 NUDT2P50583 147 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 SIX1Q15475 284 aaPredicted RBP13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 OLFML1Q6UWY5 402 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 TDRPQ86YL5 185 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 SCUBE1Q8IWY4 988 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 TDRD5Q8NAT2 981 aaKnown RBP13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 DNAJC9Q8WXX5 260 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 PTPRHQ9HD43 1115 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 ARHGAP26Q9UNA1 814 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 CNTN6Q9UQ52 1028 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 DNAJC25-GNG10A0A024R161 153 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 CABYRO75952 493 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 DNAJB2P25686 324 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 CRYMQ14894 314 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 CERCAMQ5T4B2 595 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 SYPL2Q5VXT5 272 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 RAP1GAP2Q684P5 730 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 LAYNQ6UX15 382 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 PACS1Q6VY07 963 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 UROC1Q96N76 676 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 BTBD10Q9BSF8 475 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 SLC45A1Q9Y2W3 748 aa13.46□□□□□ -0.26
PPP4R3B-206ENST00000616407 C5orf60A6NFR6 353 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 DDHD2O94830 711 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 RHOCP08134 193 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SERPINF2P08697 491 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 TPSB2P20231 275 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 WARSP23381 471 aaKnown RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 NAB1Q13506 487 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 CDH18Q13634 790 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 TPSAB1Q15661 275 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 LDLRAD1Q5T700 205 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 CMC1Q7Z7K0 106 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 FAM228AQ86W67 206 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 LGI2Q8N0V4 545 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SUDS3Q9H7L9 328 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 ENTPD7Q9NQZ7 604 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 NCKIPSDQ9NZQ3 722 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SNX10Q9Y5X0 201 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 FGF10O15520 208 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 CYBBP04839 570 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 MBL2P11226 248 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 WDR4P57081 412 aaKnown RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 DAOAP59103 153 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 PHF21BQ96EK2 531 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 PEBP4Q96S96 227 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SH3BP1Q9Y3L3 701 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 C2orf81A6NN90 581 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 ZBTB24O43167 697 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 TSPAN3O60637 253 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 GCATO75600 419 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 PTPN7P35236 360 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 NNMTP40261 264 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 HADHAP40939 763 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 DPYSL2Q16555 572 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 PCID2Q5JVF3 399 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SCARA3Q6AZY7 606 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 LRRC8EQ6NSJ5 796 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 NEPROQ6NW34 567 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 FITM2Q8N6M3 262 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 PIWIL2Q8TC59 973 aaKnown RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SPDL1Q96EA4 605 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 DCLRE1BQ9H816 532 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 SAR1AQ9NR31 198 aa13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 FBXO6Q9NRD1 293 aaPredicted RBP13.45□□□□□ -0.26
PPP4R3B-206ENST00000616407 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
PPP4R3B-206ENST00000616407 PAGE1O75459 146 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms