RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 IRAK3Q9Y616 596 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 PPIDQ08752 370 aaKnown RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 MROH9Q5TGP6 573 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 RNF43Q68DV7 783 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 SLFN11Q7Z7L1 901 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 ERO1BQ86YB8 467 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 SAMD3Q8N6K7 520 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 AGPAT1Q99943 283 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 INVSQ9Y283 1065 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 AKAP8O43823 692 aaKnown RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 RIT1Q92963 219 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 TMEM117Q9H0C3 514 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 RANBP17Q9H2T7 1088 aaKnown RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 ATAD3AQ9NVI7 634 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 WDR19Q8NEZ3 1342 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 NUDT17P0C025 328 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 MSX1P28360 303 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 CHRNB4P30926 498 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 NT5C2P49902 561 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 CCL23P55773 120 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 SNRPD1P62314 119 aaKnown RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 ZNF484Q5JVG2 852 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 PSRC1Q6PGN9 363 aaPredicted RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 CNSTQ6PJW8 725 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 KCNJ9Q92806 393 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 RIPOR3Q96MK2 946 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 ILKAPQ9H0C8 392 aaPredicted RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 TRIM39Q9HCM9 518 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 KCNQ3O43525 872 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 FOXK1P85037 733 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 SP2Q02086 613 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 TTI2Q6NXR4 508 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 FIG4Q92562 907 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
TCF4-248ENST00000616053 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 ZMYM5Q9UJ78 669 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 BMPR2Q13873 1038 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 MLH3Q9UHC1 1453 aa12.86□□□□□ -0.35
TCF4-248ENST00000616053 LOC100653049A0A140TA62 436 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CCRL2O00421 344 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CCNDBP1O95273 360 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 AGXTP21549 392 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 PFKPQ01813 784 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 ATXN7L2Q5T6C5 722 aaPredicted RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 TTC7BQ86TV6 843 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 SLC44A5Q8NCS7 719 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 OR2L3Q8NG85 312 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 GRAMD1AQ96CP6 724 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CPB2Q96IY4 423 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 C3orf14Q9HBI5 128 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 RPS6KL1Q9Y6S9 549 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 BAIAP3O94812 1187 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 FGFR4P22455 802 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CCR1P32246 355 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 MCAMP43121 646 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 TAB1Q15750 504 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 ACOT1Q86TX2 421 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CDH9Q9ULB4 789 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 O00370 1275 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CATP04040 527 aaKnown RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 CCNYL3P0C7X3 344 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 TPH1P17752 444 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 PRDX5P30044 214 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 SNRNP35Q16560 246 aaKnown RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 AAK1Q2M2I8 961 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 ZMYM1Q5SVZ6 1142 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 OR10Q1Q8NGQ4 319 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 NEDD1Q8NHV4 660 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 KCTD14Q9BQ13 255 aaPredicted RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 ZBTB40Q9NUA8 1239 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CCT8L1PA6NM43 557 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 SNRPAP09012 282 aaKnown RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 AP5B1Q2VPB7 878 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 C3orf62Q6ZUJ4 267 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 JAZF1Q86VZ6 243 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 OR8D1Q8WZ84 308 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 CST11Q9H112 138 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 POLMQ9NP87 494 aaPredicted RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 BCL10O95999 233 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 AKR1B1P15121 316 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 POLD2P49005 469 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 MAP1SQ66K74 1059 aaPredicted RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 TMEM132CQ8N3T6 1108 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 RSL24D1Q9UHA3 163 aaKnown RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 GSTK1Q9Y2Q3 226 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 FBXO21O94952 628 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 AKR1A1P14550 325 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 IL12BP29460 328 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 GTF2H1P32780 548 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 GLRBP48167 497 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 USP11P51784 963 aa12.85□□□□□ -0.35
TCF4-248ENST00000616053 IRX1P78414 480 aaPredicted RBP12.85□□□□□ -0.35
TCF4-248ENST00000616053 ALG10Q5BKT4 473 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms