RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 TMEM198Q66K66 360 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 NPNTQ6UXI9 565 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 SGF29Q96ES7 293 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 NRBF2Q96F24 287 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 FIZ1Q96SL8 496 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 HSD17B14Q9BPX1 270 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 TUFT1Q9NNX1 390 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 DNAJC28Q9NX36 388 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 SLC17A6Q9P2U8 582 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 VAV3Q9UKW4 847 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 CPQQ9Y646 472 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 THSD7AQ9UPZ6 1657 aa10.59□□□□□ -0.71
TNFAIP3-208ENST00000615468 SNED1Q8TER0 1413 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 DOCK2Q92608 1830 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 E7ESA3 106 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 FAM189A1O60320 539 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 GABBR2O75899 941 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 FGF3P11487 239 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SAT1P21673 171 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 HMGB2P26583 209 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TTKP33981 857 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SOX11P35716 441 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 GABRB2P47870 512 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 QARSP47897 775 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CDK18Q07002 472 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TAF5Q15542 800 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PRR23BQ6ZRT6 265 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CARM1Q86X55 608 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CBR4Q8N4T8 237 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TMEM102Q8N9M5 508 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TDRD5Q8NAT2 981 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 FAM213AQ9BRX8 229 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CDH19Q9H159 772 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 UPF3AQ9H1J1 476 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 RAD21L1Q9H4I0 556 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 DDX28Q9NUL7 540 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 AP4E1Q9UPM8 1137 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SLC27A5Q9Y2P5 690 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 AFG3L2Q9Y4W6 797 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TEX264Q9Y6I9 313 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ATAD5Q96QE3 1844 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SCN7AQ01118 1682 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TPP1O14773 563 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 GLRA3O75311 464 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 DDHD2O94830 711 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 HSD17B4P51659 736 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PRELPP51888 382 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 NLRP11P59045 1033 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PPM1JQ5JR12 505 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TICAM1Q8IUC6 712 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TMEM126BQ8IUX1 230 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ZCCHC7Q8N3Z6 543 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 HTRA1Q92743 480 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 MOCOSQ96EN8 888 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CNDP1Q96KN2 507 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SMYD2Q9NRG4 433 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ZNF358Q9NW07 568 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PIH1D1Q9NWS0 290 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TTLL3Q9Y4R7 772 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TIMM22Q9Y584 194 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PRSS51A0A1B0GVH4 220 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CLDN25C9JDP6 229 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 TNPO2O14787 897 aaKnown RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 BCAS2O75934 225 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 FOSP01100 380 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 CYP3A4P08684 503 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 GABPAQ06546 454 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 DCLRE1AQ6PJP8 1040 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ACDQ96AP0 544 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PBXIP1Q96AQ6 731 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ZNF577Q9BSK1 485 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ADNPQ9H2P0 1102 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 HMG20AQ9NP66 347 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 PKD2L2Q9NZM6 624 aa10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 ZNF70Q9UC06 446 aaPredicted RBP10.58□□□□□ -0.72
TNFAIP3-208ENST00000615468 HNRNPDLO14979 420 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 PHGDHO43175 533 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 CLPXO76031 633 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 MFN2O95140 757 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 EGFRP00533 1210 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 GPC3P51654 580 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 TPD52P55327 224 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 YWHAZP63104 245 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 NOMO3P69849 1222 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 MRPS15P82914 257 aaKnown RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 SP4Q02446 784 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 PIGGQ5H8A4 983 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 RSBN1LQ6PCB5 846 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 BTLAQ7Z6A9 289 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 UNC5BQ8IZJ1 945 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 ABRAQ8N0Z2 381 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 NAT16Q8N8M0 369 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 TERB1Q8NA31 727 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 LENG9Q96B70 501 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 EFHD2Q96C19 240 aaPredicted RBP10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 CCDC17Q96LX7 622 aa10.57□□□□□ -0.72
TNFAIP3-208ENST00000615468 ZNF597Q96LX8 424 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms