RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 NUP93Q8N1F7 819 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 KIF2BQ8N4N8 673 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 FUBP3Q96I24 572 aaKnown RBP eCLIP19.6■□□□□ 0.73
MMP28-204ENST00000615136 C8orf48Q96LL4 319 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 OSBPL2Q9H1P3 480 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 C12orf65Q9H3J6 166 aaKnown RBP19.6■□□□□ 0.73
MMP28-204ENST00000615136 SAGE1Q9NXZ1 904 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 GMIPQ9P107 970 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 OGDHLQ9ULD0 1010 aa19.6■□□□□ 0.73
MMP28-204ENST00000615136 HGSO14964 777 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 MOCS2O96007 188 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 GALTP07902 379 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 CCL5P13501 91 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 CYP2C18P33260 490 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 CD68P34810 354 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 MNX1P50219 401 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 GALNT2Q10471 571 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 WLSQ5T9L3 541 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 LRRC6Q86X45 466 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 NPAS4Q8IUM7 802 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 EBNA1BP2Q99848 306 aaKnown RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 NDFIP2Q9NV92 336 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 BAIAP2L1Q9UHR4 511 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 SCML2Q9UQR0 700 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 TANC1Q9C0D5 1861 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 STK10O94804 968 aaKnown RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 GARSP41250 739 aaKnown RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 PARP6Q2NL67 630 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 PREPLQ4J6C6 727 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 RNF19BQ6ZMZ0 732 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.59■□□□□ 0.73
MMP28-204ENST00000615136 C14orf80Q86SX3 495 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 ZSCAN18Q8TBC5 510 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 DPF3Q92784 378 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 APBB2Q92870 758 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 LRMDAQ9H2I8 198 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 HIPK3Q9H422 1215 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 MANSC1Q9H8J5 431 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 KLHL8Q9P2G9 620 aaPredicted RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 TRIM33Q9UPN9 1127 aa19.59■□□□□ 0.73
MMP28-204ENST00000615136 LAMA2P24043 3122 aaKnown RBP19.59■□□□□ 0.73
MMP28-204ENST00000615136 WDR27A2RRH5 827 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 ZBTB24O43167 697 aaPredicted RBP19.58■□□□□ 0.73
MMP28-204ENST00000615136 USP12O75317 370 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 TBX18O95935 607 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 APOEP02649 317 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 TROVE2P10155 538 aaKnown RBP eCLIP19.58■□□□□ 0.73
MMP28-204ENST00000615136 SESN2P58004 480 aaPredicted RBP19.58■□□□□ 0.73
MMP28-204ENST00000615136 ZNF280DQ6N043 979 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 PRSS55Q6UWB4 352 aaPredicted RBP19.58■□□□□ 0.73
MMP28-204ENST00000615136 PPM1NQ8N819 430 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 PTPRN2Q92932 1015 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 HDAC11Q96DB2 347 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 FCRL2Q96LA5 508 aaPredicted RBP19.58■□□□□ 0.73
MMP28-204ENST00000615136 AGAP3Q96P47 875 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 TRIM62Q9BVG3 475 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 XAB2Q9HCS7 855 aaKnown RBP19.58■□□□□ 0.73
MMP28-204ENST00000615136 IGSF9Q9P2J2 1179 aa19.58■□□□□ 0.73
MMP28-204ENST00000615136 WDR91A4D1P6 747 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 MTMR11A4FU01 709 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 TBC1D4O60343 1298 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 KRT37O76014 449 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 UPP2O95045 317 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 IL1BP01584 269 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 CSH1P0DML2 217 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 CSH2P0DML3 217 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 PYGBP11216 843 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 CPB1P15086 417 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 MGAT1P26572 445 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 CCR1P32246 355 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 BRMS1LQ5PSV4 323 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 MANEALQ5VSG8 457 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 PDZD4Q76G19 769 aaPredicted RBP19.58■□□□□ 0.72
MMP28-204ENST00000615136 NLRP9Q7RTR0 991 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 MON1AQ86VX9 555 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 CTAGE3PQ8IX95 158 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 ARNTL2Q8WYA1 636 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 ZNF419Q96HQ0 510 aaPredicted RBP19.58■□□□□ 0.72
MMP28-204ENST00000615136 NPHS2Q9NP85 383 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 MKS1Q9NXB0 559 aa19.58■□□□□ 0.72
MMP28-204ENST00000615136 KCNU1A8MYU2 1149 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 TRIM49D1C9J1S8 452 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 ADAM12O43184 909 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 SNRPAP09012 282 aaKnown RBP19.57■□□□□ 0.72
MMP28-204ENST00000615136 CCNFP41002 786 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 LRRC8BQ6P9F7 803 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 ARHGAP12Q8IWW6 846 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 GSDMBQ8TAX9 411 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 FAM111AQ96PZ2 611 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 HAPLN3Q96S86 360 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 SLC17A6Q9P2U8 582 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 RAD54BQ9Y620 910 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 HS3ST4Q9Y661 456 aa19.57■□□□□ 0.72
MMP28-204ENST00000615136 CXCL10P02778 98 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 MAGEA11P43364 429 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 SMAD1Q15797 465 aaKnown RBP19.56■□□□□ 0.72
MMP28-204ENST00000615136 TRIM60Q495X7 471 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 INPP5DQ92835 1189 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 VWCEQ96DN2 955 aa19.56■□□□□ 0.72
MMP28-204ENST00000615136 SEPT5Q99719 369 aaPredicted RBP19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms