RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 L1RE1Q9UN81 338 aa7.71□□□□□ -1.18
FAM228B-209ENST00000615135 INVSQ9Y283 1065 aa7.71□□□□□ -1.18
FAM228B-209ENST00000615135 PLXND1Q9Y4D7 1925 aa7.71□□□□□ -1.18
FAM228B-209ENST00000615135 KIAA1549LQ6ZVL6 1849 aa7.71□□□□□ -1.18
FAM228B-209ENST00000615135 GOLGA6CA6NDK9 693 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ZSCAN5CA6NGD5 496 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ERICH4A6NGS2 130 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 OTOL1A6NHN0 477 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TTI1O43156 1089 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 B4GALT5O43286 388 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 PSTPIP1O43586 416 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TRAPPC3O43617 180 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 SH3BP5O60239 455 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 LSM8O95777 96 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ASS1P00966 412 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CALCAP01258 141 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 KRT1P04264 644 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 NFICP08651 508 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 GOLGA6DP0CG33 693 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 DESP17661 470 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 BRD2P25440 801 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TKTP29401 623 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CHRNA3P32297 505 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 MAN1A1P33908 653 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CTNNA1P35221 906 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 PTGER3P43115 390 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 MARCKSL1P49006 195 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 AARSP49588 968 aaKnown RBP eCLIP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 GALK1P51570 392 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 MYL6P60660 151 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 NOMO3P69849 1222 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 DCAF12L1Q5VU92 463 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 EEF1DP3Q658K8 133 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 SLC27A1Q6PCB7 646 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 LPCAT2Q7L5N7 544 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CDR2LQ86X02 465 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TMC8Q8IU68 726 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 MINDY1Q8N5J2 469 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 C1orf131Q8NDD1 294 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TSTD1Q8NFU3 115 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 RPLP0P6Q8NHW5 317 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 FAM76AQ8TAV0 307 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 PIP4K2CQ8TBX8 421 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 RNF217Q8TC41 542 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 RHBDD1Q8TEB9 315 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 IPO4Q8TEX9 1081 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 UBE2Q2Q8WVN8 375 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 UBLCP1Q8WVY7 318 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CPA5Q8WXQ8 436 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 EZH1Q92800 747 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ZBTB9Q96C00 473 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 BTBD6Q96KE9 485 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CAMK1GQ96NX5 476 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 NFKBIZQ9BYH8 718 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TRIM31Q9BZY9 425 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TRIM6Q9C030 488 aaPredicted RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 PDZD7Q9H5P4 517 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 SYNCQ9H7C4 482 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 APOBEC3GQ9HC16 384 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 HPS4Q9NQG7 708 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 GDF3Q9NR23 364 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 GOLGA6AQ9NYA3 693 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ADAM22Q9P0K1 906 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 MTRF1LQ9UGC7 380 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 PARP2Q9UGN5 583 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 AFF4Q9UHB7 1163 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 CPSF3Q9UKF6 684 aaKnown RBP7.7□□□□□ -1.18
FAM228B-209ENST00000615135 TNFSF13BQ9Y275 285 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 NUB1Q9Y5A7 615 aa7.7□□□□□ -1.18
FAM228B-209ENST00000615135 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 B8ZZF3 427 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 M0QYV0 167 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 MYO1FO00160 1098 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 B3GAT3O94766 335 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 NPTXRO95502 500 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 ITGB3P05106 788 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 GLI1P08151 1106 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 RRM1P23921 792 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 ITPKBP27987 946 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 MAPK1P28482 360 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 EIF2S3P41091 472 aaKnown RBP7.69□□□□□ -1.18
FAM228B-209ENST00000615135 P2RY2P41231 377 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 SLC1A1P43005 524 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 EIF1AXP47813 144 aaKnown RBP7.69□□□□□ -1.18
FAM228B-209ENST00000615135 CARSP49589 748 aaKnown RBP7.69□□□□□ -1.18
FAM228B-209ENST00000615135 ATXN3P54252 364 aaPredicted RBP7.69□□□□□ -1.18
FAM228B-209ENST00000615135 YARSP54577 528 aaKnown RBP7.69□□□□□ -1.18
FAM228B-209ENST00000615135 TWF1Q12792 350 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 RUNX3Q13761 415 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 TCEAL1Q15170 157 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 PPP1R7Q15435 360 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 UPP1Q16831 310 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 SGSM1Q2NKQ1 1148 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 ZNF394Q53GI3 561 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 JADE1Q6IE81 842 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 DCUN1D2Q6PH85 259 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 MON1BQ7L1V2 547 aa7.69□□□□□ -1.18
FAM228B-209ENST00000615135 RABEPKQ7Z6M1 372 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms