RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 P2RY11Q96G91 374 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 MAGEH1Q9H213 219 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 NDFIP2Q9NV92 336 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 DNAJC17Q9NVM6 304 aaKnown RBP15.09■□□□□ 0.01
CD48-203ENST00000613788 RNF14Q9UBS8 474 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 TTC7AQ9ULT0 858 aaPredicted RBP15.09■□□□□ 0.01
CD48-203ENST00000613788 DUSP12Q9UNI6 340 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 RAD54BQ9Y620 910 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 KIF26AQ9ULI4 1882 aaPredicted RBP15.08■□□□□ 0.01
CD48-203ENST00000613788 NARSO43776 548 aaKnown RBP15.08■□□□□ 0.01
CD48-203ENST00000613788 FGGP02679 453 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 DGKGP49619 791 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 GNA12Q03113 381 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 ADCY2Q08462 1091 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 POLD3Q15054 466 aaPredicted RBP15.08■□□□□ 0.01
CD48-203ENST00000613788 LONRF2Q1L5Z9 754 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 GAB4Q2WGN9 574 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 PARP15Q460N3 678 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 FSCBQ5H9T9 825 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 TJAP1Q5JTD0 557 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 CXorf57Q6NSI4 855 aaKnown RBP15.08■□□□□ 0.01
CD48-203ENST00000613788 NUDT18Q6ZVK8 323 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 RALGPS2Q86X27 583 aaPredicted RBP15.08■□□□□ 0.01
CD48-203ENST00000613788 ETFBKMTQ8IXQ9 262 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 MSANTD3Q96H12 275 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 MUC3BQ9H195 1237 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 CLEC4EQ9ULY5 219 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 HEY1Q9Y5J3 304 aa15.08■□□□□ 0.01
CD48-203ENST00000613788 ARHGAP42A6NI28 874 aa15.07■□□□□ 0
CD48-203ENST00000613788 APOC4-APOC2K7ER74 178 aa15.07■□□□□ 0
CD48-203ENST00000613788 PGRMC1O00264 195 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 ZNF185O15231 689 aa15.07■□□□□ 0
CD48-203ENST00000613788 NCAM2O15394 837 aa15.07■□□□□ 0
CD48-203ENST00000613788 TULP3O75386 442 aa15.07■□□□□ 0
CD48-203ENST00000613788 URI1O94763 535 aaPredicted RBP15.07■□□□□ 0
CD48-203ENST00000613788 APOC2P02655 101 aa15.07■□□□□ 0
CD48-203ENST00000613788 MX2P20592 715 aa15.07■□□□□ 0
CD48-203ENST00000613788 PAFAH1B1P43034 410 aa15.07■□□□□ 0
CD48-203ENST00000613788 KLF1Q13351 362 aaPredicted RBP15.07■□□□□ 0
CD48-203ENST00000613788 TUBB2AQ13885 445 aa15.07■□□□□ 0
CD48-203ENST00000613788 DMC1Q14565 340 aa15.07■□□□□ 0
CD48-203ENST00000613788 DNTTIP2Q5QJE6 756 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 RNF219Q5W0B1 726 aaPredicted RBP15.07■□□□□ 0
CD48-203ENST00000613788 GRAMD4Q6IC98 578 aa15.07■□□□□ 0
CD48-203ENST00000613788 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
CD48-203ENST00000613788 LRRC49Q8IUZ0 686 aa15.07■□□□□ 0
CD48-203ENST00000613788 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.07■□□□□ 0
CD48-203ENST00000613788 WFDC5Q8TCV5 224 aa15.07■□□□□ 0
CD48-203ENST00000613788 MS4A14Q96JA4 679 aa15.07■□□□□ 0
CD48-203ENST00000613788 PNKPQ96T60 521 aa15.07■□□□□ 0
CD48-203ENST00000613788 HERPUD2Q9BSE4 406 aa15.07■□□□□ 0
CD48-203ENST00000613788 FEM1AQ9BSK4 669 aa15.07■□□□□ 0
CD48-203ENST00000613788 TUBB2BQ9BVA1 445 aa15.07■□□□□ 0
CD48-203ENST00000613788 SLC39A8Q9C0K1 460 aa15.07■□□□□ 0
CD48-203ENST00000613788 KLC2Q9H0B6 622 aa15.07■□□□□ 0
CD48-203ENST00000613788 LRRC19Q9H756 370 aa15.07■□□□□ 0
CD48-203ENST00000613788 ABCB8Q9NUT2 735 aa15.07■□□□□ 0
CD48-203ENST00000613788 SLC27A6Q9Y2P4 619 aa15.07■□□□□ 0
CD48-203ENST00000613788 MFHAS1Q9Y4C4 1052 aa15.07■□□□□ 0
CD48-203ENST00000613788 UNC80Q8N2C7 3258 aa15.07■□□□□ 0
CD48-203ENST00000613788 RASA4BC9J798 803 aa15.07■□□□□ 0
CD48-203ENST00000613788 SPECC1L-ADORA2AF8WAN1 911 aa15.07■□□□□ 0
CD48-203ENST00000613788 RASA4O43374 803 aa15.07■□□□□ 0
CD48-203ENST00000613788 MFSD11O43934 449 aa15.07■□□□□ 0
CD48-203ENST00000613788 CISD3P0C7P0 127 aa15.07■□□□□ 0
CD48-203ENST00000613788 PABPC1P11940 636 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 HLA-FP30511 346 aa15.07■□□□□ 0
CD48-203ENST00000613788 OPRD1P41143 372 aa15.07■□□□□ 0
CD48-203ENST00000613788 SLC6A11P48066 632 aa15.07■□□□□ 0
CD48-203ENST00000613788 PLK1P53350 603 aa15.07■□□□□ 0
CD48-203ENST00000613788 GBE1Q04446 702 aa15.07■□□□□ 0
CD48-203ENST00000613788 LMAN2Q12907 356 aa15.07■□□□□ 0
CD48-203ENST00000613788 SLC44A4Q53GD3 710 aa15.07■□□□□ 0
CD48-203ENST00000613788 AFMIDQ63HM1 303 aa15.07■□□□□ 0
CD48-203ENST00000613788 C12orf40Q86WS4 652 aa15.07■□□□□ 0
CD48-203ENST00000613788 CREG2Q8IUH2 290 aa15.07■□□□□ 0
CD48-203ENST00000613788 SUGP1Q8IWZ8 645 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 UBALD2Q8IYN6 164 aa15.07■□□□□ 0
CD48-203ENST00000613788 NPWQ8N729 165 aa15.07■□□□□ 0
CD48-203ENST00000613788 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.07■□□□□ 0
CD48-203ENST00000613788 WFIKKN2Q8TEU8 576 aa15.07■□□□□ 0
CD48-203ENST00000613788 ARHGEF2Q92974 986 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 CELF6Q96J87 481 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 NOL6Q9H6R4 1146 aaKnown RBP15.07■□□□□ 0
CD48-203ENST00000613788 HEBP1Q9NRV9 189 aa15.07■□□□□ 0
CD48-203ENST00000613788 DTLQ9NZJ0 730 aa15.07■□□□□ 0
CD48-203ENST00000613788 GGA2Q9UJY4 613 aa15.07■□□□□ 0
CD48-203ENST00000613788 HPCAL4Q9UM19 191 aa15.07■□□□□ 0
CD48-203ENST00000613788 PIAS3Q9Y6X2 628 aa15.07■□□□□ 0
CD48-203ENST00000613788 A0A0D9SEW6 157 aa15.06■□□□□ 0
CD48-203ENST00000613788 DFFAO00273 331 aa15.06■□□□□ 0
CD48-203ENST00000613788 MZF1P28698 734 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 CTHP32929 405 aa15.06■□□□□ 0
CD48-203ENST00000613788 CD70P32970 193 aa15.06■□□□□ 0
CD48-203ENST00000613788 CSKP41240 450 aa15.06■□□□□ 0
CD48-203ENST00000613788 SLC10A2Q12908 348 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 PDK1Q15118 436 aa15.06■□□□□ 0
CD48-203ENST00000613788 IL31Q6EBC2 164 aa15.06■□□□□ 0
CD48-203ENST00000613788 ASTLQ6HA08 431 aaPredicted RBP15.06■□□□□ 0
CD48-203ENST00000613788 NPNTQ6UXI9 565 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms