RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 FFAR2O15552 330 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 ARHGAP6O43182 974 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 USP12O75317 370 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 LUC7L3O95232 432 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 RPL13P26373 211 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 GTF2H1P32780 548 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 DRD3P35462 400 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 NNMTP40261 264 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 NFIL3Q16649 462 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 FOXD4L6Q3SYB3 417 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 SETMARQ53H47 684 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 FSCBQ5H9T9 825 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 FOXD4L3Q6VB84 417 aaPredicted RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 TMC6Q7Z403 805 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 CFAP52Q8N1V2 620 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 KCTD13Q8WZ19 329 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 PTPRN2Q92932 1015 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 AZIN2Q96A70 460 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 RPL10LQ96L21 214 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 NUCKS1Q9H1E3 243 aaKnown RBP17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 KDM4CQ9H3R0 1056 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 SLCO3A1Q9UIG8 710 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 PCDHA7Q9UN72 937 aa17.79■□□□□ 0.44
CSNK1E-215ENST00000612795 PIK3R2O00459 728 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 ACTN4O43707 911 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 SLC28A2O43868 658 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 RTN2O75298 545 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 CSO75390 466 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 DXOO77932 396 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 RGS7P49802 495 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 STK19P49842 368 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 ERVPABLB-1P60509 514 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 VAC14Q08AM6 782 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 POM121L1PQ3SYA9 428 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 MS4A13Q5J8X5 152 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 FOXD4L5Q5VV16 416 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 SCML4Q8N228 414 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 OR4C6Q8NH72 309 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 FOXD4L4Q8WXT5 416 aaPredicted RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 MYEOVQ96EZ4 313 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 KLHDC7BQ96G42 594 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 SPAG5Q96R06 1193 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 POLR1BQ9H9Y6 1135 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 THSD1Q9NS62 852 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 ARHGAP20Q9P2F6 1191 aa17.78■□□□□ 0.44
CSNK1E-215ENST00000612795 HECTD1Q9ULT8 2610 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 PRAMEF26H0Y7S4 382 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 SLC7A4O43246 635 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 PLRG1O43660 514 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 OPA1O60313 960 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 STX10O60499 249 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 MOCS2O96007 188 aaPredicted RBP17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 LTFP02788 710 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 ALPPL2P10696 532 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 LSSP48449 732 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 YWHAEP62258 255 aaKnown RBP17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 ADAM9Q13443 819 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 CDCP2Q5VXM1 449 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 DSG4Q86SJ6 1040 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 TRIM69Q86WT6 500 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 SLC25A45Q8N413 288 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 IRGQQ8WZA9 623 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 TTC9Q92623 222 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 SERPINB11Q96P15 392 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 MYOCQ99972 504 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 DPH1Q9BZG8 443 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 MAPK8IP1Q9UQF2 711 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 CA5BQ9Y2D0 317 aa17.77■□□□□ 0.44
CSNK1E-215ENST00000612795 A0A1B0GVM2 712 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 THEGLP0DJG4 465 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 VDRP11473 427 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 VAV1P15498 845 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 DGKAP23743 735 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 NUMBP49757 651 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 METAP1P53582 386 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 CUL2Q13617 745 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 DCAF6Q58WW2 860 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 APCDD1Q8J025 514 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 OR8D1Q8WZ84 308 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 MED8Q96G25 268 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 VCPIP1Q96JH7 1222 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 FCRL2Q96LA5 508 aaPredicted RBP17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 ABCG4Q9H172 646 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 EVA1BQ9NVM1 165 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 UCKL1Q9NWZ5 548 aa17.76■□□□□ 0.43
CSNK1E-215ENST00000612795 O00370 1275 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 WISP1O95388 367 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 MYL1P05976 194 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 CKMT1AP12532 417 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 NUCB2P80303 420 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 FAM46CQ5VWP2 391 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 PRICKLE2Q7Z3G6 844 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 CHSY1Q86X52 802 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 LGI2Q8N0V4 545 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 CLEC4CQ8WTT0 213 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 EEF2KMTQ96G04 330 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 ASCL3Q9NQ33 180 aa17.75■□□□□ 0.43
CSNK1E-215ENST00000612795 TJP2Q9UDY2 1190 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms