RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 KMT2EQ8IZD2 1858 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 A0A0A0MRY4 1105 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TYW5A2RUC4 315 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TMEM110-MUSTN1A8MSY1 372 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 GFRA2O00451 464 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TTI1O43156 1089 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CACNG3O60359 315 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PHF2O75151 1096 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TULP3O75386 442 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MOCS2O96007 188 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 APODP05090 189 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DCNP07585 359 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PYGMP11217 842 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DESP17661 470 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 GPD1P21695 349 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 RDXP35241 583 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 RFC1P35251 1148 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 GRIA2P42262 883 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 SLC1A1P43005 524 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 SLC6A11P48066 632 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MARCKSL1P49006 195 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CXCR3P49682 368 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DRG2P55039 364 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 VCPP55072 806 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MAMLD1Q13495 774 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DHX34Q14147 1143 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CCDC14Q49A88 953 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 FAM133BQ5BKY9 247 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PPP1R15BQ5SWA1 713 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MPP7Q5T2T1 576 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CFAP58Q5T655 872 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 ACBD5Q5T8D3 534 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PIK3R6Q5UE93 754 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 OTUD1Q5VV17 481 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 FYB2Q5VWT5 728 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 FSTL4Q6MZW2 842 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 C12orf40Q86WS4 652 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 NAT16Q8N8M0 369 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 TMEM105Q8N8V8 129 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PRELID2Q8N945 189 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF557Q8N988 423 aaPredicted RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 JOSD2Q8TAC2 188 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DDI1Q8WTU0 396 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CFAP57Q96MR6 1250 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 ZIM3Q96PE6 472 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PRRX2Q99811 253 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 RAB17Q9H0T7 212 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 CHRDQ9H2X0 955 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MRPL47Q9HD33 250 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 ARHGEF4Q9NR80 690 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PIGVQ9NUD9 493 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 ARHGEF38Q9NXL2 777 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 DLGAP2Q9P1A6 1054 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 PCYOX1Q9UHG3 505 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 FBXO10Q9UK96 956 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 UTP11Q9Y3A2 253 aaKnown RBP9.1□□□□□ -0.95
SMAD4-217ENST00000611848 KIAA1549LQ6ZVL6 1849 aa9.1□□□□□ -0.95
SMAD4-217ENST00000611848 MAP3K13O43283 966 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DAPK3O43293 454 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SPOPO43791 374 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 KAT7O95251 611 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GJB6O95452 261 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 EGFP01133 1207 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TFE3P19532 575 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CHRNA3P32297 505 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 PTGIRP43119 386 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF143P52747 638 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 RWDD2BP57060 319 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 RPL7AP62424 266 aaKnown RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ATP11AP98196 1134 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DR1Q01658 176 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SIX1Q15475 284 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 MS4A13Q5J8X5 152 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SEL1L2Q5TEA6 688 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DUPD1Q68J44 220 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 NAIF1Q69YI7 327 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 NADSYN1Q6IA69 706 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GRAMD4Q6IC98 578 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 LRIG3Q6UXM1 1119 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 MAMSTRQ6ZN01 415 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 STRADAQ7RTN6 431 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CHSY1Q86X52 802 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CPNE8Q86YQ8 564 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SLC13A5Q86YT5 568 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6L1Q8N7Z2 621 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 CENPIQ92674 756 aaPredicted RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ZBTB9Q96C00 473 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 LRRC45Q96CN5 670 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 BTBD6Q96KE9 485 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 MCEEQ96PE7 176 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ERP44Q9BS26 406 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 SLC2A11Q9BYW1 496 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 ADAM33Q9BZ11 813 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 TKTL2Q9H0I9 626 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 NEUROG2Q9H2A3 272 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 KDM4CQ9H3R0 1056 aa9.09□□□□□ -0.95
SMAD4-217ENST00000611848 FBRSL1Q9HCM7 1045 aaKnown RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 DNAJC17Q9NVM6 304 aaKnown RBP9.09□□□□□ -0.95
SMAD4-217ENST00000611848 PLK2Q9NYY3 685 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms