RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ZBTB42B2RXF5 422 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TP73O15350 636 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 FKBP6O75344 327 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SUPT7LO94864 414 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ENDOD1O94919 500 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PROCP04070 461 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SLC25A3Q00325 362 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TUSC3Q13454 348 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 MOGSQ13724 837 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ANKRD20A4Q4UJ75 823 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TMC7Q7Z402 723 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 UNC5BQ8IZJ1 945 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ST13P4Q8IZP2 240 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 PDCD6IPQ8WUM4 868 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.51□□□□□ -1.37
SNX13-213ENST00000611725 NTAN1Q96AB6 310 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 PIGVQ9NUD9 493 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ITGB4P16144 1822 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TYW5A2RUC4 315 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 MANSC4A6NHS7 340 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 CXorf49A8MYA2 514 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 SLCO1B7G3V0H7 640 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 KCNE1P15382 129 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 CRHR1P34998 444 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 SH3BGRP55822 239 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 MRPS6P82932 125 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 CSHL1Q14406 222 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 DLG2Q15700 870 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 INSCQ1MX18 579 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 C10orf120Q5SQS8 335 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 RBM15BQ8NDT2 890 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 ZNF512Q96ME7 567 aaPredicted RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 NPY6RQ99463 290 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 TSC22D3Q99576 134 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 APBA2Q99767 749 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 UNKQ9C0B0 810 aaKnown RBP6.51□□□□□ -1.37
SNX13-213ENST00000611725 CHRAC1Q9NRG0 131 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 GDAP2Q9NXN4 497 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 ADAM28Q9UKQ2 775 aa6.51□□□□□ -1.37
SNX13-213ENST00000611725 UBA6A0AVT1 1052 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 HSPA8P11142 646 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 STX5Q13190 355 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MAP7Q14244 749 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PCID2Q5JVF3 399 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CLEC20AQ6ZU45 233 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SPATA24Q86W54 205 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 FAM228AQ86W67 206 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SOCS4Q8WXH5 440 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 EFCAB1Q9HAE3 211 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PCDHA11Q9Y5I1 949 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MRPL42Q9Y6G3 142 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 DGKIO75912 1065 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 RBP1P09455 135 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 FGFR1P11362 822 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 HOXA11P31270 313 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 FLOT2Q14254 428 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SPDYAQ5MJ70 313 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SPOUT1Q5T280 376 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 KRT80Q6KB66 452 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TIGD7Q6NT04 549 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 MRNIPQ6NTE8 343 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 IZUMO2Q6UXV1 221 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PIWIL4Q7Z3Z4 852 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 ALYREFQ86V81 257 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 FCRL2Q96LA5 508 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 PNPLA8Q9NP80 782 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 IGSF9Q9P2J2 1179 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 HBS1LQ9Y450 684 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 CABYRO75952 493 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TFE3P19532 575 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 RPL9P32969 192 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 LIMK2P53671 638 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MCCD1P59942 119 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 PITX1P78337 314 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 MGAT5BQ3V5L5 792 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 RARS2Q5T160 578 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 CERCAMQ5T4B2 595 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 LRRC49Q8IUZ0 686 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PCSK9Q8NBP7 692 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 CEP70Q8NHQ1 597 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 JADE3Q92613 823 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 MYLPFQ96A32 169 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 PCED1BQ96HM7 432 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SEPT5Q99719 369 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 GATA5Q9BWX5 397 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 RHOJQ9H4E5 214 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 GIT1Q9Y2X7 761 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TRPC5OSA6NMA1 111 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 TRAFD1O14545 582 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 ZBTB24O43167 697 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 UGT1A9O60656 530 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 AP2A1O95782 977 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 SERPINA6P08185 405 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 CD52P31358 61 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 ETFBP38117 255 aa6.5□□□□□ -1.37
SNX13-213ENST00000611725 RPL14P50914 215 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 SOX4Q06945 474 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 PRKD1Q15139 912 aaPredicted RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 RBBP5Q15291 538 aaKnown RBP6.5□□□□□ -1.37
SNX13-213ENST00000611725 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms