RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 BEX3Q00994 111 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ACSBG2Q5FVE4 666 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 AGAP9Q5VTM2 703 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 TMC7Q7Z402 723 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 GDPD5Q8WTR4 605 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 RMDN1Q96DB5 314 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 DUSP16Q9BY84 665 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 SARS2Q9NP81 518 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 PAPOLBQ9NRJ5 636 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 SLC17A6Q9P2U8 582 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 CORO1CQ9ULV4 474 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 DERAQ9Y315 318 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ANGPTL3Q9Y5C1 460 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ERI2A8K979 691 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 POMCP01189 267 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 TFE3P19532 575 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 BDNFP23560 247 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ADRA1BP35368 520 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 PDAP1Q13442 181 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 SOWAHAQ2M3V2 549 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 RAB6CQ53S08 254 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ZNF470Q6ECI4 717 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 APLFQ8IW19 511 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 CCDC97Q96F63 343 aaPredicted RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 CDRT15Q96T59 188 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 IL22Q9GZX6 179 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 BRD8Q9H0E9 1235 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 RAB6CQ9H0N0 254 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 PRDM16Q9HAZ2 1276 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 IL1RL2Q9HB29 575 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 STX18Q9P2W9 335 aaKnown RBP8.87□□□□□ -0.99
LIG4-204ENST00000611712 LNPEPQ9UIQ6 1025 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 NUDT5Q9UKK9 219 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 ADAMTS5Q9UNA0 930 aa8.87□□□□□ -0.99
LIG4-204ENST00000611712 NHSQ6T4R5 1651 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 A0A0G2JLL6 359 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 E7ESA3 106 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SLCO1B7G3V0H7 640 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PLIN3O60664 434 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 MYL4P12829 197 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 HADHAP40939 763 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PSEN2P49810 448 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SLC18A2Q05940 514 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 STX5Q13190 355 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 TNFAIP8L3Q5GJ75 292 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 CERCAMQ5T4B2 595 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 OLFML1Q6UWY5 402 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PRRT2Q7Z6L0 340 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 TMEM110Q86TL2 294 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PQLC3Q8N755 202 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PDZD8Q8NEN9 1154 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SPDYE1Q8NFV5 336 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 SMARCD1Q96GM5 515 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PPP1R2P1Q96PQ5 205 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 VAT1Q99536 393 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 DDX50Q9BQ39 737 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 EBF4Q9BQW3 602 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SLC4A5Q9BY07 1137 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ACE2Q9BYF1 805 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 RRN3Q9NYV6 651 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 FAF1Q9UNN5 650 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 COL5A3P25940 1745 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 DAB1O75553 588 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 TM7SF2O76062 418 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 USP1O94782 785 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 S100BP04271 92 aaPredicted RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 C2P06681 752 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 DARSP14868 501 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 CPB1P15086 417 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 DYNC1I2Q13409 638 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 BLMHQ13867 455 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 DPYSL2Q16555 572 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PPP1R15BQ5SWA1 713 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SPOUT1Q5T280 376 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 TEDDM1Q5T9Z0 273 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 VWA5B1Q5TIE3 1220 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SCARA3Q6AZY7 606 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 IFNEQ86WN2 208 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 FAM136AQ96C01 138 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 PHF21BQ96EK2 531 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 TRIM15Q9C019 465 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 COPG2Q9UBF2 871 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ANGPT2O15123 496 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 HCRTO43612 131 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SNX2O60749 519 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 CD151P48509 253 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 RPL14P50914 215 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 PKNOX1P55347 436 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ARHGAP1Q07960 439 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 MAPRE1Q15691 268 aaKnown RBP8.86□□□□□ -0.99
LIG4-204ENST00000611712 DUSP28Q4G0W2 176 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 CGB2Q6NT52 195 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 MIB1Q86YT6 1006 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ZNF567Q8N184 647 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 SHCBP1Q8NEM2 672 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 CNBD2Q96M20 576 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ZNF570Q96NI8 536 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 GPAMQ9HCL2 828 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 ACSS2Q9NR19 701 aa8.86□□□□□ -0.99
LIG4-204ENST00000611712 TMEM216Q9P0N5 145 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms