RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 RASSF3Q86WH2 238 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 SUGP1Q8IWZ8 645 aaKnown RBP28.69■■■□□ 2.18
CSPG5-205ENST00000610462 ARMC2Q8NEN0 867 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 ACMSDQ8TDX5 336 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 CERS2Q96G23 380 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 CAPNS2Q96L46 248 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 CFHR5Q9BXR6 569 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 TRIM55Q9BYV6 548 aa28.69■■■□□ 2.18
CSPG5-205ENST00000610462 CCNCP24863 283 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 OVGP1Q12889 678 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 DNAAF3Q8N9W5 541 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 TBC1D31Q96DN5 1066 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 FCRL3Q96P31 734 aaPredicted RBP28.68■■■□□ 2.18
CSPG5-205ENST00000610462 CATSPERBQ9H7T0 1116 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 VWA8A3KMH1 1905 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 TGDSO95455 350 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 CES3Q6UWW8 571 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 TBC1D1Q86TI0 1168 aaPredicted RBP28.68■■■□□ 2.18
CSPG5-205ENST00000610462 ARHGAP12Q8IWW6 846 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 LZTR1Q8N653 840 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 ERP27Q96DN0 273 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 C8orf48Q96LL4 319 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 TMEM161AQ9NX61 479 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 SCML2Q9UQR0 700 aa28.68■■■□□ 2.18
CSPG5-205ENST00000610462 TADA2AO75478 443 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 COL6A1P12109 1028 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 CCNB1P14635 433 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 NPY2RP49146 381 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 ELF3P78545 371 aaPredicted RBP28.67■■■□□ 2.18
CSPG5-205ENST00000610462 FRG1Q14331 258 aaKnown RBP28.67■■■□□ 2.18
CSPG5-205ENST00000610462 PRPSAP1Q14558 356 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 PLEKHG4Q58EX7 1191 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 NLRP9Q7RTR0 991 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 NUP93Q8N1F7 819 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 RFWD2Q8NHY2 731 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 FCRL2Q96LA5 508 aaPredicted RBP28.67■■■□□ 2.18
CSPG5-205ENST00000610462 ZFATQ9P243 1243 aa28.67■■■□□ 2.18
CSPG5-205ENST00000610462 DFFAO00273 331 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 SYN3O14994 580 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 NQO1P15559 274 aaKnown RBP28.66■■■□□ 2.18
CSPG5-205ENST00000610462 ARTNQ5T4W7 220 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 TMEM135Q86UB9 458 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 KLHL29Q96CT2 875 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 PSAT1Q9Y617 370 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 KCNU1A8MYU2 1149 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 ARVCFO00192 962 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 KIF3CO14782 793 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 PSMD3O43242 534 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 USP1O94782 785 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 ERVK-10P10266 1014 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 VARS2Q5ST30 1063 aaKnown RBP28.66■■■□□ 2.18
CSPG5-205ENST00000610462 LRRC8DQ7L1W4 858 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 MON1AQ86VX9 555 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 KLHDC8BQ8IXV7 354 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.66■■■□□ 2.18
CSPG5-205ENST00000610462 STKLD1Q8NE28 680 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 ZNF669Q96BR6 464 aaPredicted RBP28.66■■■□□ 2.18
CSPG5-205ENST00000610462 SERPINB11Q96P15 392 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 TXLNGQ9NUQ3 528 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 SIRPGQ9P1W8 387 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 NUDT5Q9UKK9 219 aa28.66■■■□□ 2.18
CSPG5-205ENST00000610462 CACNG3O60359 315 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 TRPA1O75762 1119 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 UNC5CO95185 931 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 INHAP05111 366 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 STXBP5Q5T5C0 1151 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ASRGL1Q7L266 308 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ATPAF2Q8N5M1 289 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 CNTD1Q8N815 330 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 FBXO44Q9H4M3 255 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 GPBP1L1Q9HC44 474 aaPredicted RBP28.65■■■□□ 2.18
CSPG5-205ENST00000610462 OSER1Q9NX31 292 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 DCTN4Q9UJW0 460 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 PCDHB5Q9Y5E4 795 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 MAGEB16A2A368 324 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ATP5HO75947 161 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ALDOAP04075 364 aaKnown RBP28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ITGA2BP08514 1039 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 GP5P40197 560 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 NRG1Q02297 640 aaPredicted RBP28.65■■■□□ 2.18
CSPG5-205ENST00000610462 DDR2Q16832 855 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 DEFB115Q30KQ5 88 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 SPDYAQ5MJ70 313 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 SDHAF4Q5VUM1 108 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ICE2Q659A1 982 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 ARHGAP36Q6ZRI8 547 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 PARP9Q8IXQ6 854 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 CPNE1Q99829 537 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 MECRQ9BV79 373 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 HMX1Q9NP08 348 aaPredicted RBP28.65■■■□□ 2.18
CSPG5-205ENST00000610462 TXNDC16Q9P2K2 825 aa28.65■■■□□ 2.18
CSPG5-205ENST00000610462 AP3B1O00203 1094 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 BIRC5O15392 142 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 MGRN1O60291 552 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 GPR15P49685 360 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 GRTP1Q5TC63 336 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 ATG16L1Q676U5 607 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 NAPEPLDQ6IQ20 393 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 MSANTD2Q6P1R3 559 aa28.64■■■□□ 2.18
CSPG5-205ENST00000610462 KYAT3Q6YP21 454 aaKnown RBP28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms