RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 HMX1Q9NP08 348 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 COMMD8Q9NX08 183 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SYBUQ9NX95 663 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ADAM28Q9UKQ2 775 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 VANGL2Q9ULK5 521 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PCDHB5Q9Y5E4 795 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NR2E3Q9Y5X4 410 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 FAM237BA0A1B0GVD1 139 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ARHGAP42A6NI28 874 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 WASH4PA8MWX3 477 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 KCNU1A8MYU2 1149 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 HNRNPCL1O60812 293 aaKnown RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 AOC2O75106 756 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PAGE1O75459 146 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 AMHP03971 560 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CCNB1P14635 433 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 GP5P40197 560 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PSEN1P49768 467 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CDK18Q07002 472 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 INSCQ1MX18 579 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 DEFB115Q30KQ5 88 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 MROH9Q5TGP6 573 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 FBXW10Q5XX13 1052 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 LHX8Q68G74 356 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TIGD7Q6NT04 549 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 RWDD4Q6NW29 188 aaKnown RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PACS1Q6VY07 963 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 LRRC8DQ7L1W4 858 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CCDC91Q7Z6B0 441 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CTU1Q7Z7A3 348 aaKnown RBP12.23□□□□□ -0.45
USP6NL-206ENST00000609853 SCD5Q86SK9 330 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TP53INP2Q8IXH6 220 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ABI1Q8IZP0 508 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NDUFAF2Q8N183 169 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CD99L2Q8TCZ2 262 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 LINC01599Q8WXQ3 324 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CERS2Q96G23 380 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 CEP41Q9BYV8 373 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ECT2Q9H8V3 914 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 KLC4Q9NSK0 619 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 IL37Q9NZH6 218 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 ZFATQ9P243 1243 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 DCDC2Q9UHG0 476 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 PHF24Q9UPV7 400 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 NEU3Q9UQ49 428 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 RPS6KL1Q9Y6S9 549 aa12.23□□□□□ -0.45
USP6NL-206ENST00000609853 HMX2A2RU54 273 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 WDR91A4D1P6 747 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 HOXA2O43364 376 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 UGT1A9O60656 530 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ANXA9O76027 345 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 UNC5CO95185 931 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 HNRNPH1P31943 449 aaKnown RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 CD68P34810 354 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 RASSF2P50749 326 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 NCALDP61601 193 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 CDH17Q12864 832 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 SF3A3Q12874 501 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ELAVL2Q12926 359 aaKnown RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ZBTB17Q13105 803 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 MRPL58Q14197 206 aaKnown RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 CCDC117Q8IWD4 279 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 SCN4BQ8IWT1 228 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ATPAF2Q8N5M1 289 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 DNAAF3Q8N9W5 541 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 OR52K1Q8NGK4 314 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ZSCAN18Q8TBC5 510 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 CASP10Q92851 521 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 FATE1Q969F0 183 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 FCRL2Q96LA5 508 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 C7orf26Q96N11 449 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 AGAP3Q96P47 875 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 GORASP1Q9BQQ3 440 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 UGT1A7Q9HAW7 530 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 UGT1A10Q9HAW8 530 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 UGT1A8Q9HAW9 530 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 OLA1Q9NTK5 396 aaKnown RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 NSMCE4AQ9NXX6 385 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 ABI2Q9NYB9 513 aaPredicted RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 SIRPGQ9P1W8 387 aa12.22□□□□□ -0.45
USP6NL-206ENST00000609853 MTO1Q9Y2Z2 717 aaKnown RBP12.22□□□□□ -0.45
USP6NL-206ENST00000609853 FAM92AA1XBS5 289 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 MATN3O15232 486 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 GLRA3O75311 464 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 RTN3O95197 1032 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 JCHAINP01591 159 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 INHAP05111 366 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 ATP5BP06576 529 aaKnown RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 NFKB1P19838 968 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 SPRP35270 261 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 HADHAP40939 763 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 MLLT6P55198 1093 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 BMPR2Q13873 1038 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 ANO4Q32M45 955 aa12.21□□□□□ -0.45
USP6NL-206ENST00000609853 VARS2Q5ST30 1063 aaKnown RBP12.21□□□□□ -0.45
USP6NL-206ENST00000609853 FAM182AQ5T1J6 154 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms