RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 DDX50Q9BQ39 737 aaKnown RBP15□□□□□ -0.01
CTCFL-219ENST00000608720 LRRC40Q9H9A6 602 aa15□□□□□ -0.01
CTCFL-219ENST00000608720 SEPT10Q9P0V9 454 aa15□□□□□ -0.01
CTCFL-219ENST00000608720 TUBGCP4Q9UGJ1 667 aa15□□□□□ -0.01
CTCFL-219ENST00000608720 AP1G1O43747 822 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 PDGFRBP09619 1106 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 ITGAXP20702 1163 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 ARRB2P32121 409 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 CFAP157Q5JU67 520 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 C9orf57Q5W0N0 161 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 EPGNQ6UW88 154 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 DEFB107AQ8IZN7 70 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 DEFB106AQ8N104 65 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 DCLK2Q8N568 766 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 SHKBP1Q8TBC3 707 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 CDH19Q9H159 772 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 CXCL16Q9H2A7 254 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 EBF3Q9H4W6 596 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 ARHGAP26Q9UNA1 814 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 POMPQ9Y244 141 aa14.99□□□□□ -0.01
CTCFL-219ENST00000608720 TMEM114B3SHH9 223 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 STRNO43815 780 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 H2AFYO75367 372 aaKnown RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 PDE5AO76074 875 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 MPOP05164 745 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 COX4I1P13073 169 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 ACAT1P24752 427 aaKnown RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 INHBCP55103 352 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 FRG1Q14331 258 aaKnown RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 PAFAH1B3Q15102 231 aaKnown RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 VWA5B1Q5TIE3 1220 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 PID1Q7Z2X4 250 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 PPTC7Q8NI37 304 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 CATSPER2Q96P56 530 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 RBBP8Q99708 897 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 RTKNQ9BST9 563 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 COG4Q9H9E3 785 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 ELP3Q9H9T3 547 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 HSFX1Q9UBD0 423 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 LOC100653049A0A140TA62 436 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 KRT34O76011 436 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 HSPA4LO95757 839 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 UQCRBP14927 111 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 LIMK2P53671 638 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 TBL3Q12788 808 aaKnown RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 MED21Q13503 144 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 MAP3K21Q5TCX8 1036 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 CES3Q6UWW8 571 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 RNF111Q6ZNA4 994 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 ARMCX2Q7L311 632 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 ZNF513Q8N8E2 541 aaPredicted RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 C18orf25Q96B23 403 aaPredicted RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 FCRL3Q96P31 734 aaPredicted RBP14.98□□□□□ -0.01
CTCFL-219ENST00000608720 KCNK16Q96T55 309 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 CEP41Q9BYV8 373 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 SNX25Q9H3E2 840 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 PRDM12Q9H4Q4 367 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 CYP4F11Q9HBI6 524 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 ADAMTS6Q9UKP5 1117 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 KAT6AQ92794 2004 aa14.98□□□□□ -0.01
CTCFL-219ENST00000608720 XPO1O14980 1071 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 HCRTO43612 131 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 PFDN1O60925 122 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 RNASEH1O60930 286 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 DAB1O75553 588 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 HOXA11P31270 313 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 IREB2P48200 963 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 GJC2Q5T442 439 aaPredicted RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 SLC27A1Q6PCB7 646 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 FRMD7Q6ZUT3 714 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 STRA8Q7Z7C7 330 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 CMC1Q7Z7K0 106 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 PHTF2Q8N3S3 785 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 SLC2A14Q8TDB8 520 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 GDPD5Q8WTR4 605 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 KBTBD7Q8WVZ9 684 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 FAM149B1Q96BN6 582 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 DGCR14Q96DF8 476 aaKnown RBP14.97□□□□□ -0.01
CTCFL-219ENST00000608720 C16orf70Q9BSU1 422 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 SHCBP1LQ9BZQ2 653 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 ZNF358Q9NW07 568 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 BFARQ9NZS9 450 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 ADCY6O43306 1168 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 DCXO43602 365 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 PEX1O43933 1283 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 CD4P01730 458 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 ZNF286BP0CG31 522 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 LMO2P25791 158 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 NOS2P35228 1153 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 MTTPP55157 894 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 HPCAP84074 193 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 KLF10Q13118 480 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 SFT2D3Q587I9 215 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 DCAF6Q58WW2 860 aa14.97□□□□□ -0.01
CTCFL-219ENST00000608720 FBXO47Q5MNV8 452 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms