RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 CXorf57Q6NSI4 855 aaKnown RBP16.93■□□□□ 0.3
PMF1-206ENST00000606952 WDR93Q6P2C0 686 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 EIF1ADQ8N9N8 165 aaKnown RBP16.93■□□□□ 0.3
PMF1-206ENST00000606952 TDRD5Q8NAT2 981 aaKnown RBP16.93■□□□□ 0.3
PMF1-206ENST00000606952 MYLIPQ8WY64 445 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 RSPRY1Q96DX4 576 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 ERP44Q9BS26 406 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 TMEM121Q9BTD3 319 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 SLC39A8Q9C0K1 460 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 RAB17Q9H0T7 212 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 MAGEH1Q9H213 219 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 RAB21Q9UL25 225 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 COL4A3Q01955 1670 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 SHROOM3Q8TF72 1996 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 ILVBLA1L0T0 632 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 HEXIM1O94992 359 aaKnown RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 LUC7L3O95232 432 aaKnown RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 RHOXF2BP0C7M4 288 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 VAV1P15498 845 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 CCNCP24863 283 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 HOXD9P28356 352 aaPredicted RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 P3H1Q32P28 736 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 C6orf118Q5T5N4 469 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 FYB2Q5VWT5 728 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 DARS2Q6PI48 645 aaKnown RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 TFAP2DQ7Z6R9 452 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 ZC3H18Q86VM9 953 aaKnown RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 TP53INP2Q8IXH6 220 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 DEFB123Q8N688 67 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 CCDC89Q8N998 374 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 BPIFB1Q8TDL5 484 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 OSCP1Q8WVF1 389 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 MAML1Q92585 1016 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 TMA16Q96EY4 203 aaKnown RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 P2RY11Q96G91 374 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 CCDC114Q96M63 670 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 LRRC3BQ96PB8 259 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 MYADMQ96S97 322 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 CDX2Q99626 313 aaPredicted RBP16.92■□□□□ 0.3
PMF1-206ENST00000606952 RHOXF2Q9BQY4 288 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 POMKQ9H5K3 350 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 GDF3Q9NR23 364 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 EPS15L1Q9UBC2 864 aa16.92■□□□□ 0.3
PMF1-206ENST00000606952 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 CXorf51AA0A1B0GTR3 108 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 C5orf60A6NFR6 353 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 ARHGAP42A6NI28 874 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 RASA4BC9J798 803 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 RASA4O43374 803 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 MAFKO60675 156 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 RAMP2O60895 175 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 MAP3K6O95382 1288 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 KRT14P02533 472 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 LAMP2P13473 410 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 IVDP26440 423 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 RBL1P28749 1068 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 OR1E1P30953 314 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 ETFBP38117 255 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 GDF10P55107 478 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 OXCT1P55809 520 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 TNK2Q07912 1038 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 FCHO2Q0JRZ9 810 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 HEATR6Q6AI08 1181 aaKnown RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 TIGD7Q6NT04 549 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 C4orf22Q6V702 233 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 CIR1Q86X95 450 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 CFAP52Q8N1V2 620 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 ZNF557Q8N988 423 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 HTR3CQ8WXA8 447 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 ARHGEF2Q92974 986 aaKnown RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 GUCD1Q96NT3 240 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 LGMNQ99538 433 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 TRIM51Q9BSJ1 452 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 FAM129AQ9BZQ8 928 aa16.91■□□□□ 0.3
PMF1-206ENST00000606952 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.91■□□□□ 0.36e-9■■■■■ 30.1
PMF1-206ENST00000606952 USP15Q9Y4E8 981 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 V9GYY5 206 aaPredicted RBP16.91■□□□□ 0.3
PMF1-206ENST00000606952 SZT2Q5T011 3432 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 SGK1O00141 431 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 TBL1XO60907 577 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 GCATO75600 419 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 CYBBP04839 570 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 IFI35P80217 286 aaPredicted RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 GNA12Q03113 381 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 ZNF177Q13360 481 aaPredicted RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 SERINC3Q13530 473 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 NAA30Q147X3 362 aaPredicted RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 ELF2Q15723 593 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 CCDC13Q8IYE1 715 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 ADGRG2Q8IZP9 1017 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 ATPAF2Q8N5M1 289 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 RSAD2Q8WXG1 361 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 IRF7Q92985 503 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 ELSPBP1Q96BH3 223 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 HMCESQ96FZ2 354 aa16.9■□□□□ 0.3
PMF1-206ENST00000606952 CELF6Q96J87 481 aaKnown RBP16.9■□□□□ 0.3
PMF1-206ENST00000606952 LMLNQ96KR4 655 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms