RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 P2RY11Q96G91 374 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 PRKD2Q9BZL6 878 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 GRHL1Q9NZI5 618 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 BCCIPQ9P287 314 aaKnown RBP eCLIP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 CCL26Q9Y258 94 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 NOTCH4Q99466 2003 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 KIAA0754O94854 1291 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 HNRNPA1P09651 372 aaKnown RBP eCLIP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 ZFXP17010 805 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 TACR2P21452 398 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 IVDP26440 423 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 KRT71Q3SY84 523 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 DARS2Q6PI48 645 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 PDZD4Q76G19 769 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 GSTA5Q7RTV2 222 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 TAB3Q8N5C8 712 aaPredicted RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 RUNDC3BQ96NL0 473 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 QKIQ96PU8 341 aaKnown RBP eCLIP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 EPB41L4BQ9H329 900 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 USP29Q9HBJ7 922 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 LRRC4CQ9HCJ2 640 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 ZDHHC7Q9NXF8 308 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 ASIC3Q9UHC3 531 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 AGO1Q9UL18 857 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 NOVA2Q9UNW9 492 aaKnown RBP17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 ATP8A1Q9Y2Q0 1164 aa17.82■□□□□ 0.44
PPFIA3-207ENST00000602716 PDE4DIPQ5VU43 2346 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 TP73O15350 636 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ACSL4O60488 711 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 C1RP00736 705 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 CEBPBP17676 345 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 PTPN2P17706 415 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 NUMBP49757 651 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 KPNA1P52294 538 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 COG7P83436 770 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 HYAL1Q12794 435 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 TCEAL5Q5H9L2 206 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 GPR158Q5T848 1215 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ZDHHC24Q6UX98 284 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ARHGAP36Q6ZRI8 547 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ARHGAP12Q8IWW6 846 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 CFAP52Q8N1V2 620 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 GRK7Q8WTQ7 553 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 TLCD1Q96CP7 247 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 C1orf74Q96LT6 269 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 GCNAQ96QF7 691 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 FRMD8P1Q9BZ68 369 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 PRDM12Q9H4Q4 367 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 DRG1Q9Y295 367 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 IGLV3-10A0A075B6K4 115 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 XYLBO75191 536 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 GAS8O95995 478 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 MAGOHP61326 146 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 LGI2Q8N0V4 545 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 SMG7Q92540 1137 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ZSWIM3Q96MP5 696 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 RPRD1AQ96P16 312 aaPredicted RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 NOL6Q9H6R4 1146 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 PPANQ9NQ55 473 aaKnown RBP17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 ZNF212Q9UDV6 495 aa17.81■□□□□ 0.44
PPFIA3-207ENST00000602716 GMNCA6NCL1 334 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 PRAMEF12O95522 483 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 NUDT17P0C025 328 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 HARS2P49590 506 aaKnown RBP17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 RGS19P49795 217 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 SLC45A4Q5BKX6 768 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 RTL10Q7L3V2 364 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 OTUD6BQ8N6M0 293 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 RTL3Q8N8U3 475 aaKnown RBP17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 ITFG1Q8TB96 612 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 CEP41Q9BYV8 373 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 ZNF576Q9H609 170 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 CFAP97Q9P2B7 532 aa17.8■□□□□ 0.44
PPFIA3-207ENST00000602716 TRAV19A0A0A6YYK7 116 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 KCNN4O15554 427 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 NR2C2P49116 596 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 ZNF135P52742 658 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 RPS24P62847 133 aaKnown RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 SLC7A9P82251 487 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 IFFO1Q0D2I5 559 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 PRKD1Q15139 912 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 Q6ZNB5 142 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 PABPC3Q9H361 631 aaKnown RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 DENND4CQ5VZ89 1909 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 FGF10O15520 208 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 TSPAN3O60637 253 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 FSBPO95073 299 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 PMS2P54278 862 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 PLTPP55058 493 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 GALNT2Q10471 571 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 CBX2Q14781 532 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 RARS2Q5T160 578 aaKnown RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 C6orf89Q6UWU4 347 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 RSAD2Q8WXG1 361 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 ZYG11BQ9C0D3 744 aa17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 TTYH1Q9H313 450 aaPredicted RBP17.79■□□□□ 0.44
PPFIA3-207ENST00000602716 BCLAF3A2AJT9 711 aaKnown RBP17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 DRGXA6NNA5 263 aa17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 RPL22P35268 128 aaKnown RBP17.78■□□□□ 0.44
PPFIA3-207ENST00000602716 SLC11A2P49281 568 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms