RNA–Protein interactions for RNA: ENST00000602190.1

IRF3-231, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 413 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-231	ENST00000602190	PLRG1	O43660	514 aa	Known RBP	18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	STX10	O60499	249 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	GIMD1	P0DJR0	217 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	ECT2L	Q008S8	904 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	ZNF211	Q13398	564 aa	Predicted RBP	18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	BEND5	Q7L4P6	421 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	STK40	Q8N2I9	435 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	TMEM145	Q8NBT3	493 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	DDX50	Q9BQ39	737 aa	Known RBP	18.92	■□□□□ 0.62
IRF3-231	ENST00000602190	CFAP45	Q9UL16	551 aa		18.92	■□□□□ 0.62
IRF3-231	ENST00000602190		A0A1B0GVL5	298 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	TRIM38	O00635	465 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	PAEP	P09466	180 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	PSMD8	P48556	350 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	PLK1	P53350	603 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	E2F1	Q01094	437 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	DCAF6	Q58WW2	860 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	APCDD1	Q8J025	514 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	SLC25A45	Q8N413	288 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	OR14C36	Q8NHC7	312 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	DQX1	Q8TE96	717 aa	Known RBP	18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	CLEC4C	Q8WTT0	213 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	HSFY1	Q96LI6	401 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	SERPINB11	Q96P15	392 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	STIM2	Q9P246	746 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	MAPK8IP1	Q9UQF2	711 aa		18.91	■□□□□ 0.62
IRF3-231	ENST00000602190	CYSRT1	A8MQ03	144 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190		J3QKU1	62 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	SIGLEC6	O43699	453 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	IGLV3-25	P01717	112 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	METAP1	P53582	386 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	YWHAE	P62258	255 aa	Known RBP	18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	RHD	Q02161	417 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	DNM1	Q05193	864 aa	Known RBP	18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	SLC12A1	Q13621	1099 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	CDH18	Q13634	790 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	CNGA2	Q16280	664 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	AGBL4	Q5VU57	503 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	IGF2-AS	Q6U949	168 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	ZNF248	Q8NDW4	579 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	OR4C6	Q8NH72	309 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	ZNF578	Q96N58	590 aa	Predicted RBP	18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	SPAG5	Q96R06	1193 aa		18.9	■□□□□ 0.62
IRF3-231	ENST00000602190	SPTA1	P02549	2419 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	TYW5	A2RUC4	315 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	MAGEC1	O60732	1142 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	FBXO21	O94952	628 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	MT-CO3	P00414	261 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	LCP1	P13796	627 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	CD19	P15391	556 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	SKOR1	P84550	965 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	KCNH2	Q12809	1159 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	CARNMT1	Q8N4J0	409 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	TTC9	Q92623	222 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	SNX21	Q969T3	373 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	ALG14	Q96F25	216 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	PRMT1	Q99873	361 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	XPO7	Q9UIA9	1087 aa	Known RBP	18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	SARDH	Q9UL12	918 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	PCDHB1	Q9Y5F3	818 aa		18.89	■□□□□ 0.61
IRF3-231	ENST00000602190	TDRD6	O60522	2096 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	PMM2	O15305	246 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	RNGTT	O60942	597 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	VAV1	P15498	845 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	TBXAS1	P24557	533 aa	Predicted RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	RGS7	P49802	495 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	STK19	P49842	368 aa	Predicted RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	UCN	P55089	124 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	PCBP4	P57723	403 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	CXADR	P78310	365 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	CCDC173	Q0VFZ6	552 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	PKP1	Q13835	747 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	COBLL1	Q53SF7	1204 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	FOXD4L3	Q6VB84	417 aa	Predicted RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	PRPF39	Q86UA1	669 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	CFAP52	Q8N1V2	620 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	SLC35C1	Q96A29	364 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	RPL10L	Q96L21	214 aa	Known RBP	18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	ASCL3	Q9NQ33	180 aa		18.88	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3D	A0A087WVF3	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3I	A0A087WXS9	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3E	A0A087X179	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3K	A0A087X1G2	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	LY6G6E	A0A0G2JKS1	128 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3L	B9A6J9	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	PRAMEF26	H0Y7S4	382 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	RNF225	M0QZC1	329 aa	Predicted RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	ALOX15B	O15296	676 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	SLC16A3	O15427	465 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	ATP9B	O43861	1147 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	MOCS3	O95396	460 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TBC1D3H	P0C7X1	549 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	EPB41	P11171	864 aa	Known RBP	18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	CKMT1A	P12532	417 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	TAS2R38	P59533	333 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	ERVPABLB-1	P60509	514 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	STIL	Q15468	1287 aa		18.87	■□□□□ 0.61
IRF3-231	ENST00000602190	FOXD4L5	Q5VV16	416 aa	Predicted RBP	18.87	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms