RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 A0A1W2PQJ5 194 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 TARSL2A2RTX5 802 aaKnown RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 SIGLEC16A6NMB1 481 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 DRGXA6NNA5 263 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 ACADMP11310 421 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 MZF1P28698 734 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 RFC1P35251 1148 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 ATP11AP98196 1134 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 NRG1Q02297 640 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 ZNF177Q13360 481 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 AASDHQ4L235 1098 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 PPP1R15BQ5SWA1 713 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 ARTNQ5T4W7 220 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 SFMBT2Q5VUG0 894 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 RNF219Q5W0B1 726 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 E4F1Q66K89 784 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 ACAD10Q6JQN1 1059 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 LRRC31Q6UY01 552 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 ERMP1Q7Z2K6 904 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 ZNF366Q8N895 744 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 IQCDQ96DY2 449 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 VCPIP1Q96JH7 1222 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 FEM1AQ9BSK4 669 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 RTKNQ9BST9 563 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 NUP58Q9BVL2 599 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 PCED1AQ9H1Q7 454 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 RSPH9Q9H1X1 276 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 WSB2Q9NYS7 404 aaPredicted RBP17.69■□□□□ 0.42
HERC3-214ENST00000601319 OR51B4Q9Y5P0 310 aa17.69■□□□□ 0.42
HERC3-214ENST00000601319 EDDM13A0A1B0GTR0 161 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 E9PAM4 449 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 SLC30A4O14863 429 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 GPD1P21695 349 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 CTSOP43234 321 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 RPS14P62263 151 aaKnown RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 ZNF33AQ06730 810 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 C15orf59Q2T9L4 293 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 ZNF776Q68DI1 518 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 DNAJC24Q6P3W2 148 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 ARMCX6Q7L4S7 300 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 RABEPKQ7Z6M1 372 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 SETD3Q86TU7 594 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 MCOLN2Q8IZK6 566 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 CADM4Q8NFZ8 388 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 OR52K2Q8NGK3 314 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 FOXJ1Q92949 421 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 ZNF419Q96HQ0 510 aaPredicted RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 SMOC1Q9H4F8 434 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 TMPRSS4Q9NRS4 437 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 PPARGC1AQ9UBK2 798 aaKnown RBP17.68■□□□□ 0.42
HERC3-214ENST00000601319 PILRBQ9UKJ0 227 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 SCML1Q9UN30 329 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 NUMA1Q14980 2115 aa17.68■□□□□ 0.42
HERC3-214ENST00000601319 LNP1A1A4G5 178 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ANKRD62A6NC57 917 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 KHNYNO15037 678 aaKnown RBP17.67■□□□□ 0.42
HERC3-214ENST00000601319 GDF9O60383 454 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 SIN3BO75182 1162 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 NDUFS2O75306 463 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 CNTN5O94779 1100 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 GJB6O95452 261 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 TNFAIP3P21580 790 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ITPKAP23677 461 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ZNF143P52747 638 aaPredicted RBP17.67■□□□□ 0.42
HERC3-214ENST00000601319 HDAC4P56524 1084 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 UBASH3AP57075 661 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 SCAPQ12770 1279 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 CDO1Q16878 200 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ARL13BQ3SXY8 428 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 TTC31Q49AM3 519 aaPredicted RBP17.67■□□□□ 0.42
HERC3-214ENST00000601319 ALFQ53S48 1182 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 MANEALQ5VSG8 457 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 TCEAL6Q6IPX3 200 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ZNF783Q6ZMS7 281 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 PHLDB2Q86SQ0 1253 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 SLC41A1Q8IVJ1 513 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 FAM172AQ8WUF8 416 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 PIGKQ92643 395 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 SYN2Q92777 582 aaPredicted RBP17.67■□□□□ 0.42
HERC3-214ENST00000601319 TCEAL3Q969E4 200 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 NTAN1Q96AB6 310 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 TOE1Q96GM8 510 aaKnown RBP17.67■□□□□ 0.42
HERC3-214ENST00000601319 HSPA12BQ96MM6 686 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 RETREG1Q9H6L5 497 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 ZNF212Q9UDV6 495 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 VPS28Q9UK41 221 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 GON4LQ3T8J9 2241 aa17.67■□□□□ 0.42
HERC3-214ENST00000601319 TTC34A8MYJ7 566 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 DNTTP04053 509 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 RHOCP08134 193 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 GZMAP12544 262 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 RRM1P23921 792 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 ADRA1BP35368 520 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 NNMTP40261 264 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 KLHL30Q0D2K2 578 aa17.66■□□□□ 0.42
HERC3-214ENST00000601319 ELAVL3Q14576 367 aaKnown RBP17.66■□□□□ 0.42
HERC3-214ENST00000601319 C6orf118Q5T5N4 469 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms