RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 ARCQ7LC44 396 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 GANCQ8TET4 914 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 SNX19Q92543 992 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 IGSF8Q969P0 613 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 ALG14Q96F25 216 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
VRK3-221ENST00000600284 C1orf74Q96LT6 269 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 GBP4Q96PP9 640 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 GAREM1Q9H706 876 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 PIGVQ9NUD9 493 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 TBC1D30Q9Y2I9 924 aa16.28■□□□□ 0.2
VRK3-221ENST00000600284 LRRC72A6NJI9 287 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 F8VZ95 297 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 MID1O15344 667 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 SH3BP5O60239 455 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 C5AR1P21730 350 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 MZF1P28698 734 aaPredicted RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 SLC8A1P32418 973 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 GRIA4P48058 902 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 GALCP54803 685 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 RNASE9P60153 205 aaKnown RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 BNC1Q01954 994 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 ELAVL3Q14576 367 aaKnown RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 OTUD1Q5VV17 481 aaPredicted RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 KIAA0895LQ68EN5 471 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 LRSAM1Q6UWE0 723 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 DBX2Q6ZNG2 339 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 CIR1Q86X95 450 aaPredicted RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 XYLT1Q86Y38 959 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 MMAAQ8IVH4 418 aaKnown RBP16.27■□□□□ 0.2
VRK3-221ENST00000600284 EPS8L1Q8TE68 723 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 OMDQ99983 421 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 FEM1AQ9BSK4 669 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 TKTL2Q9H0I9 626 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 NEUROG2Q9H2A3 272 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 TM9SF3Q9HD45 589 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 TAB2Q9NYJ8 693 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 VANGL2Q9ULK5 521 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 PCDHB9Q9Y5E1 797 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 PCDHGB2Q9Y5G2 931 aa16.27■□□□□ 0.2
VRK3-221ENST00000600284 SPAARA0A1B0GVQ0 90 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 ATP9BO43861 1147 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 RNASEH2AO75792 299 aaKnown RBP16.26■□□□□ 0.19
VRK3-221ENST00000600284 FSBPO95073 299 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 ADCY5O95622 1261 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 GOT1P17174 413 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 CSNK1EP49674 416 aaKnown RBP16.26■□□□□ 0.19
VRK3-221ENST00000600284 SULT1E1P49888 294 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 DEUP1Q05D60 604 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 TRIP6Q15654 476 aaKnown RBP16.26■□□□□ 0.19
VRK3-221ENST00000600284 ZNF423Q2M1K9 1284 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 HLA-BQ31612 363 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 FAM102AQ5T9C2 384 aaPredicted RBP16.26■□□□□ 0.19
VRK3-221ENST00000600284 TAF3Q5VWG9 929 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 NOP9Q86U38 636 aaKnown RBP16.26■□□□□ 0.19
VRK3-221ENST00000600284 NAXDQ8IW45 347 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 STK40Q8N2I9 435 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 OR2T34Q8NGX1 318 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 FRS2Q8WU20 508 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 SPAG5Q96R06 1193 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 SIK2Q9H0K1 926 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 VPS16Q9H269 839 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 GANQ9H2C0 597 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 TM7SF3Q9NS93 570 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 SLC25A13Q9UJS0 675 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 OR51B4Q9Y5P0 310 aa16.26■□□□□ 0.19
VRK3-221ENST00000600284 A0A1B0GVT2 93 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 A0A1W2PP55 124 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 A0A1W2PPC4 97 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 DRGXA6NNA5 263 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 C10orf142B7Z368 130 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 IGHV4-34P06331 123 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 PROS1P07225 676 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 MMEP08473 750 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 STK19P49842 368 aaPredicted RBP16.25■□□□□ 0.19
VRK3-221ENST00000600284 CCR5P51681 352 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 RACK1P63244 317 aaKnown RBP16.25■□□□□ 0.19
VRK3-221ENST00000600284 NOMO3P69849 1222 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 CENPCQ03188 943 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 SUZ12Q15022 739 aaKnown RBP16.25■□□□□ 0.19
VRK3-221ENST00000600284 KRT31Q15323 416 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 LRRC31Q6UY01 552 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 BNIPLQ7Z465 357 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 DSG4Q86SJ6 1040 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 C14orf80Q86SX3 495 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 GLRX5Q86SX6 157 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 SETD3Q86TU7 594 aaPredicted RBP16.25■□□□□ 0.19
VRK3-221ENST00000600284 GPT2Q8TD30 523 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 ORAI3Q9BRQ5 295 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 SCNM1Q9BWG6 230 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 ADAM33Q9BZ11 813 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 KDM4CQ9H3R0 1056 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 SERGEFQ9UGK8 458 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 TMEM59LQ9UK28 342 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 ANKRD6Q9Y2G4 727 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 NEUROG3Q9Y4Z2 214 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 NUMA1Q14980 2115 aa16.25■□□□□ 0.19
VRK3-221ENST00000600284 EPG5Q9HCE0 2579 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms