RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ADIPOR2Q86V24 386 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 UMODL1-AS1Q8N2C9 162 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 LRRC57Q8N9N7 239 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 USP33Q8TEY7 942 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 HSPH1Q92598 858 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 EZH1Q92800 747 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 KCTD15Q96SI1 283 aaPredicted RBP17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 PRRX2Q99811 253 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 FEM1AQ9BSK4 669 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 PCDH18Q9HCL0 1135 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 TFR2Q9UP52 801 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 PPP2R2CQ9Y2T4 447 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 SNX10Q9Y5X0 201 aa17.01■□□□□ 0.31
SHKBP1-219ENST00000599575 CCDC66A2RUB6 948 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 MIF4GDA9UHW6 222 aaKnown RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 PRRT4C9JH25 899 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 TRIM24O15164 1050 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 BUB1O43683 1085 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 RAMP2O60895 175 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 RNF40O75150 1001 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 PAPSS2O95340 614 aaPredicted RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 SRPRAP08240 638 aaKnown RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 TCF4P15884 667 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 AVPR2P30518 371 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 CD70P32970 193 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 ARSEP51690 589 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 NDST2P52849 883 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 CDH6P55285 790 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 TAS2R40P59535 323 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 MESP2Q0VG99 397 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 CA9Q16790 459 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 PARP15Q460N3 678 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 FSCBQ5H9T9 825 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 PITRM1Q5JRX3 1037 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 DAB2IPQ5VWQ8 1189 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 MBLAC2Q68D91 279 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 TFAP2DQ7Z6R9 452 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 CIR1Q86X95 450 aaPredicted RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 ZNF513Q8N8E2 541 aaPredicted RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 DCAF4L2Q8NA75 395 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 WFDC5Q8TCV5 224 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 TSC1Q92574 1164 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 GPATCH2LQ9NWQ4 482 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 CWC15Q9P013 229 aaKnown RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 THAP10Q9P2Z0 257 aaPredicted RBP17■□□□□ 0.31
SHKBP1-219ENST00000599575 OR51B4Q9Y5P0 310 aa17■□□□□ 0.31
SHKBP1-219ENST00000599575 MACROD2A1Z1Q3 448 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 GOT1P17174 413 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 SERPINB6P35237 376 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 NNMTP40261 264 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 IRAK1P51617 712 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 CCR3P51677 355 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 GEMIN4P57678 1058 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 GNA12Q03113 381 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 SLC20A2Q08357 652 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 ENPP2Q13822 863 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 DPYSQ14117 519 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 EOGTQ5NDL2 527 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 TXNRD3NBQ6F5E7 133 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 SYT13Q7L8C5 426 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 METTL3Q86U44 580 aaKnown RBP16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 LRRC49Q8IUZ0 686 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 KATNAL2Q8IYT4 538 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 ALG14Q96F25 216 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 CSPG4P5Q96PW8 444 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 ALS2CR12Q96Q35 445 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 CIPCQ9C0C6 399 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 MUC3BQ9H195 1237 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 VPS28Q9UK41 221 aa16.99■□□□□ 0.31
SHKBP1-219ENST00000599575 GRID2IPA4D2P6 1211 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 GOLGA6L9A6NEM1 432 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ZSCAN5CA6NGD5 496 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 PI15O43692 258 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 DCNP07585 359 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 CHRM1P11229 460 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ERCC2P18074 760 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 KDELR1P24390 212 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 NTSR1P30989 418 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 CTNNA1P35221 906 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 CSKP41240 450 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 COPS2P61201 443 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ST8SIA6P61647 398 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ECT2LQ008S8 904 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 DPYSL3Q14195 570 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 POLD3Q15054 466 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 FUT11Q495W5 492 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 ZFYVE27Q5T4F4 411 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 RNF219Q5W0B1 726 aaPredicted RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 TMEM215Q68D42 235 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 RETSATQ6NUM9 610 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 PEX26Q7Z412 305 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 IL17RCQ8NAC3 791 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 TRIM58Q8NG06 486 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 EXD1Q8NHP7 514 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 FAF2Q96CS3 445 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 RBM41Q96IZ5 413 aaKnown RBP16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 GABRG3Q99928 467 aa16.98■□□□□ 0.31
SHKBP1-219ENST00000599575 CALN1Q9BXU9 219 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms