RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 CELF6Q96J87 481 aaKnown RBP15.86■□□□□ 0.13
UPF1-206ENST00000598471 TMEM121Q9BTD3 319 aa15.86■□□□□ 0.13
UPF1-206ENST00000598471 TRPV4Q9HBA0 871 aa15.86■□□□□ 0.13
UPF1-206ENST00000598471 NUP210Q8TEM1 1887 aaPredicted RBP15.86■□□□□ 0.13
UPF1-206ENST00000598471 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 DFFAO00273 331 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 UQCRHP07919 91 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 ETFBP38117 255 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 PTGIRP43119 386 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 IFNAR2P48551 515 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 ZNF33AQ06730 810 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 AP1B1Q10567 949 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 PTK6Q13882 451 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 MPP7Q5T2T1 576 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 SETD3Q86TU7 594 aaPredicted RBP15.85■□□□□ 0.13
UPF1-206ENST00000598471 ARHGAP12Q8IWW6 846 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 ZNF557Q8N988 423 aaPredicted RBP15.85■□□□□ 0.13
UPF1-206ENST00000598471 SMRP1Q8NCR6 262 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 BPIFB1Q8TDL5 484 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 DDI1Q8WTU0 396 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 HDAC11Q96DB2 347 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 MYEOVQ96EZ4 313 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 KLC2Q9H0B6 622 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 ZFP14Q9HCL3 533 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 THG1LQ9NWX6 298 aaKnown RBP15.85■□□□□ 0.13
UPF1-206ENST00000598471 ASIC3Q9UHC3 531 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 CDH22Q9UJ99 828 aa15.85■□□□□ 0.13
UPF1-206ENST00000598471 DOCK6Q96HP0 2047 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 RASA4BC9J798 803 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 H0Y626 953 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 GFRA2O00451 464 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 NDC80O14777 642 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 KCNN4O15554 427 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 RASA4O43374 803 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 IFNB1P01574 187 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 KRT14P02533 472 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 RHOCP08134 193 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 GARSP41250 739 aaKnown RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 OXCT1P55809 520 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 PPIDQ08752 370 aaKnown RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 POLD3Q15054 466 aaPredicted RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 PRKD1Q15139 912 aaPredicted RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 ELF2Q15723 593 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 AFMIDQ63HM1 303 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 TIGD7Q6NT04 549 aaPredicted RBP15.84■□□□□ 0.13
UPF1-206ENST00000598471 ZNF783Q6ZMS7 281 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 ZNF354CQ86Y25 554 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 IFT20Q8IY31 132 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 CARNMT1Q8N4J0 409 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 FAM71DQ8N9W8 422 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 ERP44Q9BS26 406 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 TRIM51Q9BSJ1 452 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 SLC39A8Q9C0K1 460 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 MAGEH1Q9H213 219 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 PCDH9Q9HC56 1237 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 NDFIP2Q9NV92 336 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 ZNF212Q9UDV6 495 aa15.84■□□□□ 0.13
UPF1-206ENST00000598471 ILVBLA1L0T0 632 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 HEPACAM2A8MVW5 462 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 LUC7L3O95232 432 aaKnown RBP15.83■□□□□ 0.12
UPF1-206ENST00000598471 RBL1P28749 1068 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 VIPR2P41587 438 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 SGSHP51688 502 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 MRPS25P82663 173 aaKnown RBP15.83■□□□□ 0.12
UPF1-206ENST00000598471 SLC7A5Q01650 507 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 GUCY2DQ02846 1103 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 CDH18Q13634 790 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 ANO4Q32M45 955 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 C4orf22Q6V702 233 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 TPGS1Q6ZTW0 290 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 OTOP3Q7RTS5 596 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 MFN1Q8IWA4 741 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 YAF2Q8IY57 180 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 CCDC13Q8IYE1 715 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 CCDC33Q8N5R6 958 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 RIN3Q8TB24 985 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 NSMCE1Q8WV22 266 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 OSCP1Q8WVF1 389 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 HTR3CQ8WXA8 447 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 RTP4Q96DX8 246 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 TSGA13Q96PP4 275 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 MYADMQ96S97 322 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 LGMNQ99538 433 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 POMKQ9H5K3 350 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 UBE2ZQ9H832 354 aaPredicted RBP15.83■□□□□ 0.12
UPF1-206ENST00000598471 SP110Q9HB58 689 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 DUS2Q9NX74 493 aaKnown RBP15.83■□□□□ 0.12
UPF1-206ENST00000598471 TBC1D30Q9Y2I9 924 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 USP15Q9Y4E8 981 aaPredicted RBP15.83■□□□□ 0.12
UPF1-206ENST00000598471 WNT6Q9Y6F9 365 aa15.83■□□□□ 0.12
UPF1-206ENST00000598471 NFATC1O95644 943 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 ADH1CP00326 375 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 CCNCP24863 283 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 PAPOLAP51003 745 aaKnown RBP15.82■□□□□ 0.12
UPF1-206ENST00000598471 GNA12Q03113 381 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 SMAD4Q13485 552 aaKnown RBP15.82■□□□□ 0.12
UPF1-206ENST00000598471 PDGFRLQ15198 375 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 P3H1Q32P28 736 aa15.82■□□□□ 0.12
UPF1-206ENST00000598471 POTEHQ6S545 545 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms