RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 SARM1Q6SZW1 724 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 VPS36Q86VN1 386 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 DRC7Q8IY82 874 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 CCDC185Q8N715 623 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF366Q8N895 744 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF653Q96CK0 615 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 TRIM11Q96F44 468 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 PPP1R9BQ96SB3 815 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.21■□□□□ 0.35
SSBP4-204ENST00000597724 MAGEB5Q9BZ81 275 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 PRDM16Q9HAZ2 1276 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 CNOT8Q9UFF9 292 aaKnown RBP17.21■□□□□ 0.35
SSBP4-204ENST00000597724 OR12D3Q9UGF7 316 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 MBD1Q9UIS9 605 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-204ENST00000597724 OR51B4Q9Y5P0 310 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 LAMA1P25391 3075 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 A0A087X0T9 212 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 TMEM191CA6NGB0 347 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 FAM72CH0Y354 149 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 AP5Z1O43299 807 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 FAM228BP0C875 321 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 MYBL1P10243 752 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 C7P10643 843 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 TGM1P22735 817 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SULT2A1Q06520 285 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SCAPQ12770 1279 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 ARID5BQ14865 1188 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 HNRNPA1L2Q32P51 320 aaKnown RBP17.2■□□□□ 0.34
SSBP4-204ENST00000597724 FAM72AQ5TYM5 149 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 MANEALQ5VSG8 457 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 PMS2CLQ68D20 193 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 FAM72DQ6L9T8 149 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 TMC6Q7Z403 805 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SLFN11Q7Z7L1 901 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SETD3Q86TU7 594 aaPredicted RBP17.2■□□□□ 0.34
SSBP4-204ENST00000597724 FAM72BQ86X60 149 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 TMPRSS6Q8IU80 811 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 OR8K1Q8NGG5 319 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 OR2T3Q8NH03 318 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 RPL10LQ96L21 214 aaKnown RBP17.2■□□□□ 0.34
SSBP4-204ENST00000597724 DNAJC7Q99615 494 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 ZYG11BQ9C0D3 744 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 PRSS16Q9NQE7 514 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 PPARGC1AQ9UBK2 798 aaKnown RBP17.2■□□□□ 0.34
SSBP4-204ENST00000597724 ZNF212Q9UDV6 495 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SLCO3A1Q9UIG8 710 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 SCINQ9Y6U3 715 aa17.2■□□□□ 0.34
SSBP4-204ENST00000597724 THADAQ6YHU6 1953 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 IGHV1OR15-9A0A0B4J2B8 117 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 MAP3K13O43283 966 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 LRP3O75074 770 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 EPN2O95208 641 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 RHOCP08134 193 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 DESP17661 470 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 NUMBP49757 651 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 RNF219Q5W0B1 726 aaPredicted RBP17.19■□□□□ 0.34
SSBP4-204ENST00000597724 SCYL2Q6P3W7 929 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 KIAA1324Q6UXG2 1013 aaKnown RBP17.19■□□□□ 0.34
SSBP4-204ENST00000597724 TFAP2DQ7Z6R9 452 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 GPR161Q8N6U8 529 aaKnown RBP17.19■□□□□ 0.34
SSBP4-204ENST00000597724 PRCCQ92733 491 aaPredicted RBP17.19■□□□□ 0.34
SSBP4-204ENST00000597724 SIPA1Q96FS4 1042 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 ARRDC1-AS1Q9H2J1 176 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 MTG2Q9H4K7 406 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 FBRSQ9HAH7 460 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 MRPL47Q9HD33 250 aaKnown RBP17.19■□□□□ 0.34
SSBP4-204ENST00000597724 PARD6AQ9NPB6 346 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 ITM2CQ9NQX7 267 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 MYO1AQ9UBC5 1043 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 VPS28Q9UK41 221 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 CYP8B1Q9UNU6 501 aa17.19■□□□□ 0.34
SSBP4-204ENST00000597724 TTC34A8MYJ7 566 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 PSMA2P25787 234 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 EIF4A3P38919 411 aaKnown RBP17.18■□□□□ 0.34
SSBP4-204ENST00000597724 NNMTP40261 264 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 STK19P49842 368 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-204ENST00000597724 VASPP50552 380 aaPredicted RBP17.18■□□□□ 0.34
SSBP4-204ENST00000597724 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 SPEM2Q0P670 501 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 SPDYCQ5MJ68 293 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 C6orf118Q5T5N4 469 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 ALKBH5Q6P6C2 394 aaKnown RBP17.18■□□□□ 0.34
SSBP4-204ENST00000597724 KIAA2013Q8IYS2 634 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 ARFGAP1Q8N6T3 406 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 FNIP1Q8TF40 1166 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 TRIM7Q9C029 511 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 MUC3BQ9H195 1237 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 RETREG1Q9H6L5 497 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 CD93Q9NPY3 652 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 USP36Q9P275 1121 aaKnown RBP17.18■□□□□ 0.34
SSBP4-204ENST00000597724 FZD10Q9ULW2 581 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 PCDHGA5Q9Y5G8 931 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 RALGAPA1Q6GYQ0 2036 aa17.18■□□□□ 0.34
SSBP4-204ENST00000597724 SPTBN4Q9H254 2564 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 A0A0D9SEW6 157 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 ILVBLA1L0T0 632 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 TARSL2A2RTX5 802 aaKnown RBP17.17■□□□□ 0.34
SSBP4-204ENST00000597724 LRIG2O94898 1065 aa17.17■□□□□ 0.34
SSBP4-204ENST00000597724 TPM1P09493 284 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms