RNA–Protein interactions for RNA: ENST00000597636.5

IRF3-219, Transcript of interferon regulatory factor 3, humanhuman

TSL 5

Gene IRF3, Length 2,874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-219ENST00000597636 RIPK3Q9Y572 518 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 MAFBQ9Y5Q3 323 aaPredicted RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 TMEM221A6NGB7 291 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 STX16-NPEPL1H3BU86 382 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 XPO1O14980 1071 aaKnown RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 AMHP03971 560 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 KRT19P08727 400 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 VARSP26640 1264 aaKnown RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 GP5P40197 560 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 GARSP41250 739 aaKnown RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 SESN2P58004 480 aaPredicted RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 SMAD1Q15797 465 aaKnown RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 SLC44A4Q53GD3 710 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 KCNT2Q6UVM3 1135 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 FAM183BPQ6ZVS7 135 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 TMEM176AQ96HP8 235 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 ANKRD36BP1Q96IX9 119 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 CDHR1Q96JP9 859 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 TBCBQ99426 244 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 OSBPL6Q9BZF3 934 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 ILKAPQ9H0C8 392 aaPredicted RBP15.86■□□□□ 0.13
IRF3-219ENST00000597636 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
IRF3-219ENST00000597636 H3BNH8 94 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 NEMP1O14524 444 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 TRIM13O60858 407 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 SUPT3HO75486 399 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PROZP22891 400 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 CYP2F1P24903 491 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 MGAT1P26572 445 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 NUP107P57740 925 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 DPYSQ14117 519 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 GPR162Q16538 588 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PATL1Q86TB9 770 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 CARM1Q86X55 608 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 GRIN3AQ8TCU5 1115 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 TRPC4APQ8TEL6 797 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ZBED3Q96IU2 234 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 TEPSINQ96N21 525 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 OSBPL11Q9BXB4 747 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 CAAP1Q9H8G2 361 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 COQ10BQ9H8M1 238 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PRDM16Q9HAZ2 1276 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 RNF146Q9NTX7 359 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PIH1D1Q9NWS0 290 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 MYRFQ9Y2G1 1151 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 SIP14410 1827 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 KPNA7A9QM74 516 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 HDAC3O15379 428 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 P4HA1P13674 534 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PPARGP37231 505 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 MAGEA12P43365 314 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ENTPD1P49961 510 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ART3Q13508 389 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 IL23RQ5VWK5 629 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 C9orf131Q5VYM1 1079 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 DCLK2Q8N568 766 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 NSUN6Q8TEA1 469 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 SREK1Q8WXA9 508 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 QKIQ96PU8 341 aaKnown RBP eCLIP15.85■□□□□ 0.13
IRF3-219ENST00000597636 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 GATA5Q9BWX5 397 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 EFCAB1Q9HAE3 211 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ZNF711Q9Y462 761 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 F5H423 210 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 TOMM70O94826 608 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ERVK-10P10266 1014 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ADSLP30566 484 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 TUBA4AP68366 448 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PDAP1Q13442 181 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 IKBKEQ14164 716 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 RFTN1Q14699 578 aaPredicted RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 GRTP1Q5TC63 336 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 HEATR6Q6AI08 1181 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 ISL2Q96A47 359 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PPP1R36Q96LQ0 422 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 NAT9Q9BTE0 207 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 ZNF385DQ9H6B1 395 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 OLAHQ9NV23 265 aa15.85■□□□□ 0.13
IRF3-219ENST00000597636 PAIP2BQ9ULR5 123 aaKnown RBP15.85■□□□□ 0.13
IRF3-219ENST00000597636 SPATA31C2B4DYI2 1134 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 MDM4O15151 490 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 B4GALT4O60513 344 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 CILPO75339 1184 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 MPSTP25325 297 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 EFNA5P52803 228 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 NDST2P52849 883 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 ZNF280AP59817 542 aaPredicted RBP15.84■□□□□ 0.13
IRF3-219ENST00000597636 HERC3Q15034 1050 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 SEL1L3Q68CR1 1132 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 DPH6Q7L8W6 267 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 ADAM32Q8TC27 787 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 ATP6V1E2Q96A05 226 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 WRNIP1Q96S55 665 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 CPNE1Q99829 537 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 NIFKQ9BYG3 293 aaKnown RBP15.84■□□□□ 0.13
IRF3-219ENST00000597636 GPRC5DQ9NZD1 345 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 SIX4Q9UIU6 781 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 ZNF487B1APH4 448 aa15.84■□□□□ 0.13
IRF3-219ENST00000597636 H2AFYO75367 372 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms