RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TYRP14679 529 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 ACTN2P35609 894 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 HADHBP55084 474 aaKnown RBP13.35□□□□□ -0.27
SCAF1-202ENST00000595242 ARHGAP44Q17R89 818 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 TEX35Q5T0J7 233 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 TMPRSS6Q8IU80 811 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 CXorf38Q8TB03 319 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 ZNF516Q92618 1163 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 WBP2Q969T9 261 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 SIPA1Q96FS4 1042 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 C8orf48Q96LL4 319 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 AGPAT1Q99943 283 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 TLR10Q9BXR5 811 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 RNF14Q9UBS8 474 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 NOCTQ9UK39 431 aaKnown RBP13.35□□□□□ -0.27
SCAF1-202ENST00000595242 BOD1L1Q8NFC6 3051 aa13.35□□□□□ -0.27
SCAF1-202ENST00000595242 GRID2IPA4D2P6 1211 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 CBX4O00257 560 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 RFPL3O75679 317 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 IGLV3-19P01714 112 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 TUBBP07437 444 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 PDGFRBP09619 1106 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 C1SP09871 688 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 IRF1P10914 325 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 DGKGP49619 791 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 WNT7BP56706 349 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 DNAJC3Q13217 504 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 SURF1Q15526 300 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 HECTD3Q5T447 861 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 HES3Q5TGS1 186 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 MEI1Q5TIA1 1274 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 SLFN11Q7Z7L1 901 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 FAM124AQ86V42 546 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 ERICH1Q86X53 443 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 LRRC57Q8N9N7 239 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 EPS8L1Q8TE68 723 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 KBTBD7Q8WVZ9 684 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 PRCCQ92733 491 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-202ENST00000595242 OSBPL9Q96SU4 736 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 LGMNQ99538 433 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 ISCUQ9H1K1 167 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 ARGLU1Q9NWB6 273 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-202ENST00000595242 RBAKQ9NYW8 714 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-202ENST00000595242 WDR35Q9P2L0 1181 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 CHORDC1Q9UHD1 332 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-202ENST00000595242 RAB21Q9UL25 225 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 AHCTF1Q8WYP5 2266 aa13.34□□□□□ -0.27
SCAF1-202ENST00000595242 UBR5O95071 2799 aaPredicted RBP13.34□□□□□ -0.27
SCAF1-202ENST00000595242 ANKRD62A6NC57 917 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 BUB1O43683 1085 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PALMO75781 387 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 VNN1O95497 513 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 LDOC1O95751 146 aaPredicted RBP13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CISD3P0C7P0 127 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 DLATP10515 647 aaKnown RBP13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ACADMP11310 421 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 GZMAP12544 262 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TNFAIP3P21580 790 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 YWHAQP27348 245 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 GRIA4P48058 902 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CSRP3P50461 194 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ZNF132P52740 706 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CACNA2D1P54289 1103 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 GALCP54803 685 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TMPRSS3P57727 454 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TBC1D25Q3MII6 688 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 KCNT1Q5JUK3 1230 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ARHGAP40Q5TG30 622 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 FBXL19Q6PCT2 694 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 LAYNQ6UX15 382 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 DPH6Q7L8W6 267 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CREG2Q8IUH2 290 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 WDR49Q8IV35 697 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PPM1KQ8N3J5 372 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PDZD8Q8NEN9 1154 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 MYCBPAPQ8TBZ2 947 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 UBE2Q2Q8WVN8 375 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 RFFLQ8WZ73 363 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 KAT5Q92993 513 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 FAM84AQ96KN4 292 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CNDP2Q96KP4 475 aaKnown RBP13.33□□□□□ -0.28
SCAF1-202ENST00000595242 MMS19Q96T76 1030 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PCED1AQ9H1Q7 454 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 C6orf106Q9H6K1 298 aaPredicted RBP13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CCSER2Q9H7U1 834 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ANKZF1Q9H8Y5 726 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PDE11AQ9HCR9 933 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TM9SF3Q9HD45 589 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 TMEM30AQ9NV96 361 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ITGA11Q9UKX5 1188 aa13.33□□□□□ -0.28
SCAF1-202ENST00000595242 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.33□□□□□ -0.28
SCAF1-202ENST00000595242 PTPRJQ12913 1337 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms