RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 CCDC110Q8TBZ0 833 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 DEPDC1BQ8WUY9 529 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 TXLNGYQ9BZA5 131 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 SLC39A8Q9C0K1 460 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 NOL6Q9H6R4 1146 aaKnown RBP15.58■□□□□ 0.08
VRK3-207ENST00000594092 MED4Q9NPJ6 270 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 PAK5Q9P286 719 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 STOML2Q9UJZ1 356 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 TPX2Q9ULW0 747 aaKnown RBP15.58■□□□□ 0.08
VRK3-207ENST00000594092 MYO9BQ13459 2157 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 DFFAO00273 331 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 ARHGAP15Q53QZ3 475 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 Q6ZNB5 142 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 PCGF5Q86SE9 256 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 UMODL1-AS1Q8N2C9 162 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 TAB3Q8N5C8 712 aaPredicted RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 PRICKLE1Q96MT3 831 aaPredicted RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 ZIM3Q96PE6 472 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 CDCA3Q99618 268 aaPredicted RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 TASP1Q9H6P5 420 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 DONSONQ9NYP3 566 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 TRDMT1O14717 391 aaKnown RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 SCAMP3O14828 347 aaKnown RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 PAPLNO95428 1278 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 PMS2P54278 862 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 WASHC5Q12768 1159 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 MORF4L2Q15014 288 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 RABGAP1LQ5R372 815 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 ARHGAP36Q6ZRI8 547 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 CMTM8Q8IZV2 173 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 IQCKQ8N0W5 287 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 CFAP52Q8N1V2 620 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 GOLGA6L1Q8N7Z2 621 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 CPT1BQ92523 772 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 TSGA13Q96PP4 275 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 DDX50Q9BQ39 737 aaKnown RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 FERMT1Q9BQL6 677 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 PRO3102Q9H379 93 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 SEPT10Q9P0V9 454 aa15.57■□□□□ 0.08
VRK3-207ENST00000594092 FARP1Q9Y4F1 1045 aaPredicted RBP15.57■□□□□ 0.08
VRK3-207ENST00000594092 A0A0A0MRY4 1105 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 AGPSO00116 658 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 KCNK1O00180 336 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 RNF103O00237 685 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 OPA1O60313 960 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 ZNF189O75820 626 aaPredicted RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 OAS2P29728 719 aaKnown RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 SGSHP51688 502 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 NDST2P52849 883 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 RPS24P62847 133 aaKnown RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 UAP1Q16222 522 aaPredicted RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 ANKRD20A2Q5SQ80 823 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 ANKRD20A1Q5TYW2 823 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 PDE4DIPQ5VU43 2346 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 ANKRD20A3Q5VUR7 823 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 TMC5Q6UXY8 1006 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 C4orf22Q6V702 233 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 CEP128Q6ZU80 1094 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 CCDC25Q86WR0 208 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 CCDC13Q8IYE1 715 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 ATPAF2Q8N5M1 289 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 SMG7Q92540 1137 aaKnown RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 SPATA13Q96N96 652 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 FOXP3Q9BZS1 431 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 SMG9Q9H0W8 520 aaKnown RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 CFAP97Q9P2B7 532 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 LSM7Q9UK45 103 aaKnown RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 ARHGAP26Q9UNA1 814 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 PLAAQ9Y263 795 aa15.56■□□□□ 0.08
VRK3-207ENST00000594092 ZFP37Q9Y6Q3 630 aaPredicted RBP15.56■□□□□ 0.08
VRK3-207ENST00000594092 H3BQF6 201 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 LEFTY2O00292 366 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 TSPAN3O60637 253 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 STK10O94804 968 aaKnown RBP15.55■□□□□ 0.08
VRK3-207ENST00000594092 CCNCP24863 283 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 PTPN3P26045 913 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 CHKAP35790 457 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 MAPKAPK2P49137 400 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
VRK3-207ENST00000594092 BASP1P80723 227 aaKnown RBP15.55■□□□□ 0.08
VRK3-207ENST00000594092 ZNF33AQ06730 810 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 ANKRD22Q5VYY1 191 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 LRIG3Q6UXM1 1119 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 CHRDL2Q6WN34 429 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 LRRC49Q8IUZ0 686 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 PPIL6Q8IXY8 311 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 TTC16Q8NEE8 873 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 PPP2R3CQ969Q6 453 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 ZBTB9Q96C00 473 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 CEP41Q9BYV8 373 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 IGFLR1Q9H665 355 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 RETREG1Q9H6L5 497 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 SFXN1Q9H9B4 322 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 PIDD1Q9HB75 910 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 RAB6BQ9NRW1 208 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 SHOC2Q9UQ13 582 aa15.55■□□□□ 0.08
VRK3-207ENST00000594092 SOBPA7XYQ1 873 aa15.54■□□□□ 0.08
VRK3-207ENST00000594092 RASA4BC9J798 803 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms