RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAM182AQ5T1J6 154 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 PPIL6Q8IXY8 311 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 TSEN2Q8NCE0 465 aaKnown RBP21.33■■□□□ 1.01
PNKP-203ENST00000593946 TIFAQ96CG3 184 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 PRICKLE1Q96MT3 831 aaPredicted RBP21.33■■□□□ 1.01
PNKP-203ENST00000593946 SPATA13Q96N96 652 aa21.33■■□□□ 1.01
PNKP-203ENST00000593946 REV3LO60673 3130 aa21.33■■□□□ 1
PNKP-203ENST00000593946 DFFAO00273 331 aa21.32■■□□□ 1
PNKP-203ENST00000593946 MTSS1O43312 755 aa21.32■■□□□ 1
PNKP-203ENST00000593946 STK10O94804 968 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 MAPKAPK2P49137 400 aa21.32■■□□□ 1
PNKP-203ENST00000593946 DHX9Q08211 1270 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 RABGAP1LQ5R372 815 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ANKRD20A2Q5SQ80 823 aa21.32■■□□□ 1
PNKP-203ENST00000593946 GPR158Q5T848 1215 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ANKRD20A1Q5TYW2 823 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ANKRD20A3Q5VUR7 823 aa21.32■■□□□ 1
PNKP-203ENST00000593946 HOOK3Q86VS8 718 aa21.32■■□□□ 1
PNKP-203ENST00000593946 CIR1Q86X95 450 aaPredicted RBP21.32■■□□□ 1
PNKP-203ENST00000593946 LRRC49Q8IUZ0 686 aa21.32■■□□□ 1
PNKP-203ENST00000593946 NAT8LQ8N9F0 302 aa21.32■■□□□ 1
PNKP-203ENST00000593946 DEPDC1BQ8WUY9 529 aa21.32■■□□□ 1
PNKP-203ENST00000593946 PRCCQ92733 491 aaPredicted RBP21.32■■□□□ 1
PNKP-203ENST00000593946 MRPL38Q96DV4 380 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 CDCA3Q99618 268 aaPredicted RBP21.32■■□□□ 1
PNKP-203ENST00000593946 DDX50Q9BQ39 737 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 NUP210Q8TEM1 1887 aaPredicted RBP21.32■■□□□ 1
PNKP-203ENST00000593946 SPDYE4A6NLX3 237 aa21.32■■□□□ 1
PNKP-203ENST00000593946 SOBPA7XYQ1 873 aa21.32■■□□□ 1
PNKP-203ENST00000593946 KCNK1O00180 336 aa21.32■■□□□ 1
PNKP-203ENST00000593946 OPHN1O60890 802 aa21.32■■□□□ 1
PNKP-203ENST00000593946 BASP1P80723 227 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 TEAD2Q15562 447 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ARHGAP15Q53QZ3 475 aa21.32■■□□□ 1
PNKP-203ENST00000593946 GRASPQ7Z6J2 395 aaPredicted RBP21.32■■□□□ 1
PNKP-203ENST00000593946 CCDC13Q8IYE1 715 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ZCCHC9Q8N567 271 aaKnown RBP21.32■■□□□ 1
PNKP-203ENST00000593946 ATPAF2Q8N5M1 289 aa21.32■■□□□ 1
PNKP-203ENST00000593946 VN1R2Q8NFZ6 395 aa21.32■■□□□ 1
PNKP-203ENST00000593946 FOXP3Q9BZS1 431 aa21.32■■□□□ 1
PNKP-203ENST00000593946 TSPYL1Q9H0U9 437 aa21.32■■□□□ 1
PNKP-203ENST00000593946 TASP1Q9H6P5 420 aa21.32■■□□□ 1
PNKP-203ENST00000593946 VIPAS39Q9H9C1 493 aa21.32■■□□□ 1
PNKP-203ENST00000593946 RAB6BQ9NRW1 208 aa21.32■■□□□ 1
PNKP-203ENST00000593946 HPCAL4Q9UM19 191 aa21.32■■□□□ 1
PNKP-203ENST00000593946 ARHGAP26Q9UNA1 814 aa21.32■■□□□ 1
PNKP-203ENST00000593946 SMAPO00193 183 aa21.31■■□□□ 1
PNKP-203ENST00000593946 RFXAPO00287 272 aa21.31■■□□□ 1
PNKP-203ENST00000593946 MAFKO60675 156 aa21.31■■□□□ 1
PNKP-203ENST00000593946 CCNCP24863 283 aa21.31■■□□□ 1
PNKP-203ENST00000593946 PTPN3P26045 913 aa21.31■■□□□ 1
PNKP-203ENST00000593946 CHKAP35790 457 aa21.31■■□□□ 1
PNKP-203ENST00000593946 NTHL1P78549 312 aa21.31■■□□□ 1
PNKP-203ENST00000593946 ANKRD22Q5VYY1 191 aa21.31■■□□□ 1
PNKP-203ENST00000593946 ARHGAP36Q6ZRI8 547 aa21.31■■□□□ 1
PNKP-203ENST00000593946 ARHGEF18Q6ZSZ5 1173 aa21.31■■□□□ 1
PNKP-203ENST00000593946 FAM217AQ8IXS0 508 aa21.31■■□□□ 1
PNKP-203ENST00000593946 CMTM8Q8IZV2 173 aa21.31■■□□□ 1
PNKP-203ENST00000593946 CFAP52Q8N1V2 620 aa21.31■■□□□ 1
PNKP-203ENST00000593946 TAB3Q8N5C8 712 aaPredicted RBP21.31■■□□□ 1
PNKP-203ENST00000593946 ZSCAN18Q8TBC5 510 aaPredicted RBP21.31■■□□□ 1
PNKP-203ENST00000593946 SEPT10Q9P0V9 454 aa21.31■■□□□ 1
PNKP-203ENST00000593946 LSM7Q9UK45 103 aaKnown RBP21.31■■□□□ 1
PNKP-203ENST00000593946 ZFP37Q9Y6Q3 630 aaPredicted RBP21.31■■□□□ 1
PNKP-203ENST00000593946 MAGEA6P43360 314 aa21.3■■□□□ 1
PNKP-203ENST00000593946 PAPOLAP51003 745 aaKnown RBP21.3■■□□□ 1
PNKP-203ENST00000593946 CDH4P55283 916 aa21.3■■□□□ 1
PNKP-203ENST00000593946 RPS24P62847 133 aaKnown RBP21.3■■□□□ 1
PNKP-203ENST00000593946 KCNJ11Q14654 390 aa21.3■■□□□ 1
PNKP-203ENST00000593946 SLMAPQ14BN4 828 aa21.3■■□□□ 1
PNKP-203ENST00000593946 HTR3DQ70Z44 454 aa21.3■■□□□ 1
PNKP-203ENST00000593946 ZNF567Q8N184 647 aa21.3■■□□□ 1
PNKP-203ENST00000593946 CFAP97Q9P2B7 532 aa21.3■■□□□ 1
PNKP-203ENST00000593946 RASA4BC9J798 803 aa21.29■■□□□ 1
PNKP-203ENST00000593946 GFRA2O00451 464 aa21.29■■□□□ 1
PNKP-203ENST00000593946 TRDMT1O14717 391 aaKnown RBP21.29■■□□□ 1
PNKP-203ENST00000593946 CHADO15335 359 aa21.29■■□□□ 1
PNKP-203ENST00000593946 RASA4O43374 803 aa21.29■■□□□ 1
PNKP-203ENST00000593946 TMEM63AO94886 807 aa21.29■■□□□ 1
PNKP-203ENST00000593946 METTL18O95568 372 aa21.29■■□□□ 1
PNKP-203ENST00000593946 OR1E1P30953 314 aa21.29■■□□□ 1
PNKP-203ENST00000593946 SGSHP51688 502 aa21.29■■□□□ 1
PNKP-203ENST00000593946 TTC39BQ5VTQ0 682 aaPredicted RBP21.29■■□□□ 1
PNKP-203ENST00000593946 SMG7Q92540 1137 aaKnown RBP21.29■■□□□ 1
PNKP-203ENST00000593946 PWWP2AQ96N64 755 aa21.29■■□□□ 1
PNKP-203ENST00000593946 VAT1Q99536 393 aa21.29■■□□□ 1
PNKP-203ENST00000593946 CEP41Q9BYV8 373 aa21.29■■□□□ 1
PNKP-203ENST00000593946 SFXN1Q9H9B4 322 aa21.29■■□□□ 1
PNKP-203ENST00000593946 ETNK1Q9HBU6 452 aa21.29■■□□□ 1
PNKP-203ENST00000593946 ZMYM5Q9UJ78 669 aa21.29■■□□□ 1
PNKP-203ENST00000593946 ZNF510Q9Y2H8 683 aa21.29■■□□□ 1
PNKP-203ENST00000593946 ATP8A1Q9Y2Q0 1164 aa21.29■■□□□ 1
PNKP-203ENST00000593946 TCRBV7S3A2A0A539 114 aa21.29■■□□□ 1
PNKP-203ENST00000593946 LEFTY2O00292 366 aa21.29■■□□□ 1
PNKP-203ENST00000593946 ZNF197O14709 1029 aa21.29■■□□□ 1
PNKP-203ENST00000593946 RAMP2O60895 175 aa21.29■■□□□ 1
PNKP-203ENST00000593946 AVPR1AP37288 418 aa21.29■■□□□ 1
PNKP-203ENST00000593946 YBEYP58557 167 aaPredicted RBP21.29■■□□□ 1
PNKP-203ENST00000593946 ZBTB17Q13105 803 aa21.29■■□□□ 1
PNKP-203ENST00000593946 UAP1Q16222 522 aaPredicted RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms