RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 OR14C36Q8NHC7 312 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 ZNF606Q8WXB4 792 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 FAM204AQ9H8W3 233 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.39■■□□□ 1.33
SSBP4-203ENST00000593641 RAXQ9Y2V3 346 aa23.39■■□□□ 1.33
SSBP4-203ENST00000593641 BIN1O00499 593 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 FGFR1OPO95684 399 aaKnown RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 IL1BP01584 269 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 IGLV3-25P01717 112 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 ABCB4P21439 1286 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 MZF1P28698 734 aaPredicted RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 CD38P28907 300 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 STK19P49842 368 aaPredicted RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 CCR5P51681 352 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 ADPRHP54922 357 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 SULT2A1Q06520 285 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 MORC3Q14149 939 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 SMAD1Q15797 465 aaKnown RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 RABGAP1LQ5R372 815 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 TTC39BQ5VTQ0 682 aaPredicted RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 AADATQ8N5Z0 425 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 PTPRN2Q92932 1015 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 FAM81BQ96LP2 452 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 FAM129BQ96TA1 746 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 SRRTQ9BXP5 876 aaKnown RBP23.38■■□□□ 1.33
SSBP4-203ENST00000593641 GDF3Q9NR23 364 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 DKK4Q9UBT3 224 aa23.38■■□□□ 1.33
SSBP4-203ENST00000593641 KCNU1A8MYU2 1149 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 YKT6O15498 198 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 ITGAVP06756 1048 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 SLC2A3P11169 496 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 PDGFRAP16234 1089 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 OXCT1P55809 520 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 PDCLQ13371 301 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 COL28A1Q2UY09 1125 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 SLC45A4Q5BKX6 768 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 DHRS13Q6UX07 377 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 GATAD2AQ86YP4 633 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 CCAR2Q8N163 923 aaKnown RBP23.37■■□□□ 1.33
SSBP4-203ENST00000593641 RNF34Q969K3 372 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 SERAC1Q96JX3 654 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 EBF2Q9HAK2 575 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 CYTH4Q9UIA0 394 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 DOCK9Q9BZ29 2069 aa23.37■■□□□ 1.33
SSBP4-203ENST00000593641 SYNJ2BP-COX16A0A087WUM0 186 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 A0A1B0GVM2 712 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 FAM149AA5PLN7 773 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 TRABD2BA6NFA1 517 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 TCAF2A6NFQ2 919 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 WNT1P04628 370 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 CCR1P32246 355 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 ARRB1P49407 418 aaPredicted RBP23.36■■□□□ 1.33
SSBP4-203ENST00000593641 CDK17Q00537 523 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 KCNJ12Q14500 433 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 PRAMEF14Q5SWL7 426 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 CIR1Q86X95 450 aaPredicted RBP23.36■■□□□ 1.33
SSBP4-203ENST00000593641 MARCH9Q86YJ5 346 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 SPAG5Q96R06 1193 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 PPP1R9BQ96SB3 815 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 DDIT4Q9NX09 232 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 COX16Q9P0S2 106 aa23.36■■□□□ 1.33
SSBP4-203ENST00000593641 ARID1BQ8NFD5 2236 aaPredicted RBP23.36■■□□□ 1.33
SSBP4-203ENST00000593641 LOC400499M0QZD8 3231 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3DA0A087WVF3 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3IA0A087WXS9 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3EA0A087X179 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3KA0A087X1G2 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3FA6NER0 549 aaPredicted RBP23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3LB9A6J9 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3HP0C7X1 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 USP8P40818 1118 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 NUMBP49757 651 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 PITX1P78337 314 aaPredicted RBP23.35■■□□□ 1.33
SSBP4-203ENST00000593641 CYP4F3Q08477 520 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 ACAP1Q15027 740 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3GQ6DHY5 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3CQ6IPX1 549 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 DSG4Q86SJ6 1040 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 PDZD3Q86UT5 571 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 TBC1D3Q8IZP1 549 aaPredicted RBP23.35■■□□□ 1.33
SSBP4-203ENST00000593641 PDCD7Q8N8D1 485 aaKnown RBP23.35■■□□□ 1.33
SSBP4-203ENST00000593641 ACP6Q9NPH0 428 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 PCDHGA1Q9Y5H4 931 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 ASXL3Q9C0F0 2248 aa23.35■■□□□ 1.33
SSBP4-203ENST00000593641 A0A1W2PR77 199 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 ENC1O14682 589 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 LDOC1O95751 146 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 GLI1P08151 1106 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 TAF5Q15542 800 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 DEFB106AQ8N104 65 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 OXR1Q8N573 874 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 HNRNPLLQ8WVV9 542 aaKnown RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 OR8D1Q8WZ84 308 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 CNDP2Q96KP4 475 aaKnown RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 RPRD1AQ96P16 312 aaPredicted RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 PRMT1Q99873 361 aaKnown RBP23.34■■□□□ 1.33
SSBP4-203ENST00000593641 CRACR2AQ9BSW2 395 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 SCUBE2Q9NQ36 999 aa23.34■■□□□ 1.33
SSBP4-203ENST00000593641 SLC25A13Q9UJS0 675 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms