RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 OR6B2Q6IFH4 312 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 SLC26A9Q7LBE3 791 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CHSY1Q86X52 802 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 MARCH9Q86YJ5 346 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 LGI2Q8N0V4 545 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CFAP52Q8N1V2 620 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CARNMT1Q8N4J0 409 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 ATP6V0D2Q8N8Y2 350 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CADM4Q8NFZ8 388 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 GPT2Q8TD30 523 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 GBP4Q96PP9 640 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 PRMT1Q99873 361 aaKnown RBP13.64□□□□□ -0.23
H3F3B-213ENST00000593254 GPR174Q9BXC1 333 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 FAM204AQ9H8W3 233 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 IL21RQ9HBE5 538 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 PLCB1Q9NQ66 1216 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 PRSS16Q9NQE7 514 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 DDIT4Q9NX09 232 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 CEP83Q9Y592 693 aa13.64□□□□□ -0.23
H3F3B-213ENST00000593254 DOCK4Q8N1I0 1966 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 TRABD2BA6NFA1 517 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 F5H5T6 163 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 TK2O00142 265 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 PES1O00541 588 aaKnown RBP13.63□□□□□ -0.23
H3F3B-213ENST00000593254 DAB1O75553 588 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 GRAP2O75791 330 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 ASLP04424 464 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 ATXN1LP0C7T5 689 aaKnown RBP13.63□□□□□ -0.23
H3F3B-213ENST00000593254 CYP11B1P15538 503 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 CCR1P32246 355 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 BNC1Q01954 994 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SLC6A3Q01959 620 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 PITRM1Q5JRX3 1037 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 CDKAL1Q5VV42 579 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 MMS22LQ6ZRQ5 1243 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 ZDHHC17Q8IUH5 632 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 CCDC117Q8IWD4 279 aaPredicted RBP13.63□□□□□ -0.23
H3F3B-213ENST00000593254 KDM1BQ8NB78 822 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SETD7Q8WTS6 366 aaKnown RBP13.63□□□□□ -0.23
H3F3B-213ENST00000593254 MRGPRX3Q96LB0 322 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 GAREM1Q9H706 876 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SYNCQ9H7C4 482 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 TM7SF3Q9NS93 570 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 TAB2Q9NYJ8 693 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SUN2Q9UH99 717 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SLC12A6Q9UHW9 1150 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 FNDC3AQ9Y2H6 1198 aaKnown RBP13.63□□□□□ -0.23
H3F3B-213ENST00000593254 PCDHGB2Q9Y5G2 931 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 SPTA1P02549 2419 aa13.63□□□□□ -0.23
H3F3B-213ENST00000593254 TMEM131Q92545 1883 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 SYNJ2BP-COX16A0A087WUM0 186 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 MEI4A8MW99 385 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 CER1O95813 267 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ABCB4P21439 1286 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 NOS2P35228 1153 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 GABRB2P47870 512 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ST8SIA6P61647 398 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ZBTB16Q05516 673 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ARID5BQ14865 1188 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 TTC39BQ5VTQ0 682 aaPredicted RBP13.62□□□□□ -0.23
H3F3B-213ENST00000593254 OTUD1Q5VV17 481 aaPredicted RBP13.62□□□□□ -0.23
H3F3B-213ENST00000593254 GALNT15Q8N3T1 639 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
H3F3B-213ENST00000593254 TMEM35BQ8NCS4 154 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 CDC6Q99741 560 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 STK33Q9BYT3 514 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 PCED1AQ9H1Q7 454 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 COX16Q9P0S2 106 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 HECTD1Q9ULT8 2610 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 COL6A6A6NMZ7 2263 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 ITIH6Q6UXX5 1313 aa13.62□□□□□ -0.23
H3F3B-213ENST00000593254 A0A1B0GVM2 712 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 TCAF2A6NFQ2 919 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 METTL12A8MUP2 240 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 F8VZ95 297 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 FLRT2O43155 660 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 MOCS3O95396 460 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 SRPRAP08240 638 aaKnown RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 SCNN1AP37088 669 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 MATKP42679 507 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 RPS14P62263 151 aaKnown RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 MTA1Q13330 715 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 SLC12A1Q13621 1099 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 KRT31Q15323 416 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 SMAD1Q15797 465 aaKnown RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 HLA-BQ31612 363 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 HNRNPA1L2Q32P51 320 aaKnown RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 RABGAP1LQ5R372 815 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 DCAF12L1Q5VU92 463 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 IL27RAQ6UWB1 636 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 FAM124AQ86V42 546 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 CCAR2Q8N163 923 aaKnown RBP13.61□□□□□ -0.23
H3F3B-213ENST00000593254 C1orf216Q8TAB5 229 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 EPS8L1Q8TE68 723 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 SLC39A7Q92504 469 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 RNF34Q969K3 372 aa13.61□□□□□ -0.23
H3F3B-213ENST00000593254 NT5C3BQ969T7 300 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms