RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ZFYVE27Q5T4F4 411 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ADGRF1Q5T601 910 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 HEATR6Q6AI08 1181 aaKnown RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 NPNTQ6UXI9 565 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 SPOCD1Q6ZMY3 1216 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 RFX8Q6ZV50 586 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ASCL5Q7RTU5 278 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 POLNQ7Z5Q5 900 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 UNC45BQ8IWX7 931 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 SPEM1Q8N4L4 309 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 TRIM58Q8NG06 486 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 PCDH19Q8TAB3 1148 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 COG1Q8WTW3 980 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 TEKT4Q8WW24 435 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 CELF6Q96J87 481 aaKnown RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 MS4A14Q96JA4 679 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 HEMGNQ9BXL5 484 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ARHGEF4Q9NR80 690 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 TBC1D14Q9P2M4 693 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 SAE1Q9UBE0 346 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 OR12D3Q9UGF7 316 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 DNAI1Q9UI46 699 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 FBXO4Q9UKT5 387 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 PCDHA3Q9Y5H8 950 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 MIA3Q5JRA6 1907 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 hCG_1818297A0A087WSY0 165 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 F5H5T6 163 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 KCNK3O14649 394 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 MFSD11O43934 449 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 GFRA3O60609 400 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 SLC2A3P11169 496 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 PECAM1P16284 738 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 DRD1P21728 446 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 EPHB2P29323 1055 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CD70P32970 193 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CDKN2BP42772 138 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CCR3P51677 355 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 TPI1P60174 286 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 GBE1Q04446 702 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ACAP1Q15027 740 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 RPS6KA1Q15418 735 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 HADHQ16836 314 aaKnown RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ARL13BQ3SXY8 428 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 LRRC38Q5VT99 294 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 KAZNQ674X7 775 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CXorf57Q6NSI4 855 aaKnown RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ARHGAP36Q6ZRI8 547 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ADAT2Q7Z6V5 191 aaKnown RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 NLRP14Q86W24 1093 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CCDC50Q8IVM0 306 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 SYCE1Q8N0S2 351 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 CARNMT1Q8N4J0 409 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 KCTD6Q8NC69 237 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 RPLP0P6Q8NHW5 317 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 FAM71BQ8TC56 605 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 NKD2Q969F2 451 aaPredicted RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 TBC1D31Q96DN5 1066 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 HAPLN3Q96S86 360 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 BBS2Q9BXC9 721 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 DCLK3Q9C098 648 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 KLC2Q9H0B6 622 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 OSBPL2Q9H1P3 480 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 NOL6Q9H6R4 1146 aaKnown RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ZDHHC4Q9NPG8 344 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 SPHK2Q9NRA0 654 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 R3HDM2Q9Y2K5 976 aaKnown RBP9.92□□□□□ -0.82
DDX39A-220ENST00000593008 ACTL7AQ9Y615 435 aa9.92□□□□□ -0.82
DDX39A-220ENST00000593008 FRYLO94915 3013 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 IGLV3-10A0A075B6K4 115 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 GOLGA6L9A6NEM1 432 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 DRGXA6NNA5 263 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 CHURC1-FNTBB4DL54 471 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 PROB1E7EW31 1015 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 K7EQS6 105 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 DCLK1O15075 740 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 PENKP01210 267 aaPredicted RBP9.91□□□□□ -0.82
DDX39A-220ENST00000593008 KRT7P08729 469 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 TDGF1P13385 188 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 TYRP14679 529 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 DESP17661 470 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ERCC2P18074 760 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 GLDCP23378 1020 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ACVRL1P37023 503 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 PXNP49023 591 aaPredicted RBP9.91□□□□□ -0.82
DDX39A-220ENST00000593008 FNTBP49356 437 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 RWDD2BP57060 319 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 GAD2Q05329 585 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 TAZQ16635 292 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ZNF528Q3MIS6 628 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 BOLA3Q53S33 107 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 C2orf27AQ580R0 203 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ANKRD20A8PQ5CZ79 823 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 NCBP2-AS2Q69YL0 99 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 ZC3H14Q6PJT7 736 aaKnown RBP9.91□□□□□ -0.82
DDX39A-220ENST00000593008 LEKR1Q6ZMV7 388 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 RFX6Q8HWS3 928 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 SYNPOQ8N3V7 929 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 CPXM2Q8N436 756 aa9.91□□□□□ -0.82
DDX39A-220ENST00000593008 PLD5Q8N7P1 536 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms