RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 CEP70Q8NHQ1 597 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 DIS3LQ8TF46 1054 aaKnown RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 SREK1Q8WXA9 508 aaKnown RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 HPDLQ96IR7 371 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 PPP1R36Q96LQ0 422 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 CSPG4P5Q96PW8 444 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 LGMNQ99538 433 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 RBBP8Q99708 897 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 GATA5Q9BWX5 397 aaPredicted RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 TEX13BQ9BXU2 312 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 FZD8Q9H461 694 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 AK5Q9Y6K8 562 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 RPS6KL1Q9Y6S9 549 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 ZNF638Q14966 1978 aaKnown RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 ENO3P13929 434 aaPredicted RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 MPSTP25325 297 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 EPHA3P29320 983 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 DPP6P42658 865 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 GALK1P51570 392 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 INCA1Q0VD86 236 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 SETD3Q86TU7 594 aaPredicted RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 PDCD6IPQ8WUM4 868 aaKnown RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 KLHL32Q96NJ5 620 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 KCTD15Q96SI1 283 aaPredicted RBP18.37■□□□□ 0.53
SPC24-206ENST00000592540 PDZD7Q9H5P4 517 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 WDR41Q9HAD4 459 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 KIAA1257Q9ULG3 409 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 AP4E1Q9UPM8 1137 aa18.37■□□□□ 0.53
SPC24-206ENST00000592540 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 H2AFYO75367 372 aaKnown RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 LTFP02788 710 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 CHRNGP07510 517 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 ATXN3P54252 364 aaPredicted RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 IRF9Q00978 393 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 PPP2R5DQ14738 602 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 PDK1Q15118 436 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 CPSF7Q8N684 471 aaKnown RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 NLRP7Q8WX94 980 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 FCRL3Q96P31 734 aaPredicted RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 SLC4A5Q9BY07 1137 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 GGA3Q9NZ52 723 aa18.36■□□□□ 0.53
SPC24-206ENST00000592540 PPP1R1BQ9UD71 204 aaPredicted RBP18.36■□□□□ 0.53
SPC24-206ENST00000592540 A0A096LPK6 155 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 A0A1B0GTW7 788 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 HACD1B0YJ81 288 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 SLC22A2O15244 555 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 HDAC3O15379 428 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 PAPSS1O43252 624 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 GJB1P08034 283 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 PSMC3P17980 439 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 HMGB2P26583 209 aaKnown RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 SPRP35270 261 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 PPARGP37231 505 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 SULT2A1Q06520 285 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 PPIDQ08752 370 aaKnown RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 SPANXN3Q5MJ09 141 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 FSTL4Q6MZW2 842 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 CLEC14AQ86T13 490 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 ADAM32Q8TC27 787 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 MOCOSQ96EN8 888 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 NT5C1AQ9BXI3 368 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 ZNF385DQ9H6B1 395 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 CNOT11Q9UKZ1 510 aaKnown RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 RAP2CQ9Y3L5 183 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 SPDYE16A6NNV3 312 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 STX16-NPEPL1H3BU86 382 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 ACOT8O14734 319 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 RNASEH2AO75792 299 aaKnown RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 F7P08709 466 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 LIMK2P53671 638 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 SEL1L3Q68CR1 1132 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 STRA8Q7Z7C7 330 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 NUP93Q8N1F7 819 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 AGBL3Q8NEM8 1001 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 TSPAN14Q8NG11 270 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 PGLYRP2Q96PD5 576 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 B3GNT5Q9BYG0 378 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 CEP41Q9BYV8 373 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 PRDM16Q9HAZ2 1276 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 NMRAL1Q9HBL8 299 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 ZNF277Q9NRM2 450 aaPredicted RBP18.35■□□□□ 0.53
SPC24-206ENST00000592540 GTF2IRD1Q9UHL9 959 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 ZNF510Q9Y2H8 683 aa18.35■□□□□ 0.53
SPC24-206ENST00000592540 RNF103O00237 685 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 GABBR2O75899 941 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 MPOP05164 745 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 STAG3L1P0CL83 205 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 ZNF26P17031 533 aaPredicted RBP18.34■□□□□ 0.53
SPC24-206ENST00000592540 PSMB4P28070 264 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 RPL14P50914 215 aaKnown RBP18.34■□□□□ 0.53
SPC24-206ENST00000592540 CYTH1Q15438 398 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 DLG2Q15700 870 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 PPP1R26Q5T8A7 1209 aaPredicted RBP18.34■□□□□ 0.53
SPC24-206ENST00000592540 TMEM110Q86TL2 294 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 TTC30AQ86WT1 665 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 CHERPQ8IWX8 916 aaKnown RBP18.34■□□□□ 0.53
SPC24-206ENST00000592540 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
SPC24-206ENST00000592540 ABTB1Q969K4 478 aaPredicted RBP18.34■□□□□ 0.53
SPC24-206ENST00000592540 AGAP3Q96P47 875 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms