RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 SLC12A2P55011 1212 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 RPS13P62277 151 aaKnown RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 B4GALNT1Q00973 533 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 POU5F1Q01860 360 aaKnown RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 ID2Q02363 134 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 DCTN1Q14203 1278 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 LRRC24Q50LG9 513 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 LIPMQ5VYY2 423 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 CLEC4GQ6UXB4 293 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 LDHAL6AQ6ZMR3 332 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 SYNE3Q6ZMZ3 975 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 CCDC73Q6ZRK6 1079 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 MOGAT3Q86VF5 341 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 ADGRF4Q8IZF3 695 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 OR52N4Q8NGI2 321 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 PRSS3P2Q8NHM4 247 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 WIPF2Q8TF74 440 aaPredicted RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 GOLGA1Q92805 767 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 FAM167BQ9BTA0 163 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 CCDC94Q9BW85 323 aaPredicted RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 RSPH9Q9H1X1 276 aaPredicted RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 ERVK-5Q9HDB9 667 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 G6PC2Q9NQR9 355 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 ITM2CQ9NQX7 267 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 KIF17Q9P2E2 1029 aa3.84□□□□□ -1.79
VMP1-212ENST00000591782 FBXO9Q9UK97 447 aaPredicted RBP3.84□□□□□ -1.79
VMP1-212ENST00000591782 VGLL3A8MV65 326 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 GRM8O00222 908 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 KIF5CO60282 957 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 USP12O75317 370 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 CCDC172P0C7W6 258 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 CTSAP10619 480 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 VDRP11473 427 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 CYP19A1P11511 503 aaPredicted RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 PAX3P23760 479 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 ADD2P35612 726 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 MMP13P45452 471 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 PCP4P48539 62 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 DHX8Q14562 1220 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 PGM5Q15124 567 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 TRIP6Q15654 476 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 SMAD1Q15797 465 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 ETFDHQ16134 617 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 INO80DQ53TQ3 878 aaPredicted RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 FAM57BQ71RH2 274 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 MDGA2Q7Z553 956 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 UBE2Q1Q7Z7E8 422 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 BCAS4Q8TDM0 211 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 AFG1LQ8WV93 481 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 THAP4Q8WY91 577 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 ATP2A3Q93084 1043 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 RPL36ALQ969Q0 106 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 ARRDC3Q96B67 414 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 PIGSQ96S52 555 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 SLC29A3Q9BZD2 475 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 SPRTNQ9H040 489 aaPredicted RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 MAF1Q9H063 256 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 TRNAU1APQ9NX07 287 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 MTMR4Q9NYA4 1195 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 ZNF70Q9UC06 446 aaPredicted RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 IPO11Q9UI26 975 aaKnown RBP3.83□□□□□ -1.8
VMP1-212ENST00000591782 FEM1BQ9UK73 627 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 BAG5Q9UL15 447 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 SMC3Q9UQE7 1217 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 RPGRIP1LQ68CZ1 1315 aa3.83□□□□□ -1.8
VMP1-212ENST00000591782 SCRIBQ14160 1630 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 DISP3Q9P2K9 1392 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 NPHP1O15259 732 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 IRAK2O43187 625 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 HTATSF1O43719 755 aaKnown RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 TLR2O60603 784 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 UGDHO60701 494 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 TOP3BO95985 862 aaKnown RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 TPM3P06753 285 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 LYL1P12980 280 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 TNNT3P45378 269 aaPredicted RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 TDO2P48775 406 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 AARSP49588 968 aaKnown RBP eCLIP3.82□□□□□ -1.8
VMP1-212ENST00000591782 RBM5P52756 815 aaKnown RBP eCLIP3.82□□□□□ -1.8
VMP1-212ENST00000591782 ADPRHP54922 357 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 CDK18Q07002 472 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 NEXNQ0ZGT2 675 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 ARL13AQ5H913 290 aaPredicted RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 KIAA1755Q5JYT7 1200 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 C10orf25Q5T742 122 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 SHC4Q6S5L8 630 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 ZNF793Q6ZN11 406 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 DEF8Q6ZN54 512 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 RFX8Q6ZV50 586 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 RTL10Q7L3V2 364 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 RASGRP2Q7LDG7 609 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 LCA5Q86VQ0 697 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 PAQR4Q8N4S7 273 aaPredicted RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 PTGR2Q8N8N7 351 aaPredicted RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 FAM47BQ8NA70 645 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 DENND1AQ8TEH3 1009 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 ADAD1Q96M93 576 aaKnown RBP3.82□□□□□ -1.8
VMP1-212ENST00000591782 ZNF778Q96MU6 729 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 NPAS1Q99742 590 aa3.82□□□□□ -1.8
VMP1-212ENST00000591782 PIMREGQ9BSJ6 248 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms