RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 DCAF6Q58WW2 860 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 MS4A13Q5J8X5 152 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 RNF219Q5W0B1 726 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ATL3Q6DD88 541 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 NAPEPLDQ6IQ20 393 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 SMYD4Q8IYR2 804 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 APCDD1Q8J025 514 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 OXR1Q8N573 874 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 KDM1BQ8NB78 822 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 AZIN2Q96A70 460 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 NAF1Q96HR8 494 aaKnown RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 FCRL2Q96LA5 508 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 DDX50Q9BQ39 737 aaKnown RBP16.46■□□□□ 0.23
DDX39A-216ENST00000591275 MIS12Q9H081 205 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 HPSEQ9Y251 543 aa16.46■□□□□ 0.23
DDX39A-216ENST00000591275 ITIH6Q6UXX5 1313 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 RTN2O75298 545 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 MOCS3O95396 460 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 CALCAP01258 141 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 DRD3P35462 400 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 YWHAEP62258 255 aaKnown RBP16.45■□□□□ 0.22
DDX39A-216ENST00000591275 CFHR1Q03591 330 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 DPYDQ12882 1025 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 PROX2Q3B8N5 592 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 TBC1D25Q3MII6 688 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 LCLAT1Q6UWP7 414 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 LGI2Q8N0V4 545 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 DCBLD1Q8N8Z6 715 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 MFSD2AQ8NA29 543 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 DQX1Q8TE96 717 aaKnown RBP16.45■□□□□ 0.22
DDX39A-216ENST00000591275 SLC35F5Q8WV83 523 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 IRGQQ8WZA9 623 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 PTPRN2Q92932 1015 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 LGMNQ99538 433 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 ARHGAP20Q9P2F6 1191 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 XPO7Q9UIA9 1087 aaKnown RBP16.45■□□□□ 0.22
DDX39A-216ENST00000591275 CA5BQ9Y2D0 317 aa16.45■□□□□ 0.22
DDX39A-216ENST00000591275 M0QYV0 167 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 TRIM38O00635 465 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 CETN3O15182 167 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 SIGLEC6O43699 453 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 ACP1P24666 158 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 SYKP43405 635 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 NDUFA8P51970 172 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 KCNH2Q12809 1159 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 EDRF1Q3B7T1 1238 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 RAP1GAP2Q684P5 730 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 TMEM270Q6UE05 265 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 PRPF39Q86UA1 669 aaKnown RBP16.44■□□□□ 0.22
DDX39A-216ENST00000591275 UBR7Q8N806 425 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 RFFLQ8WZ73 363 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 CYTH4Q9UIA0 394 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 PCDHB1Q9Y5F3 818 aa16.44■□□□□ 0.22
DDX39A-216ENST00000591275 TDRD6O60522 2096 aaKnown RBP16.44■□□□□ 0.22
DDX39A-216ENST00000591275 MT-CO3P00414 261 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 FYNP06241 537 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
DDX39A-216ENST00000591275 ELAVL3Q14576 367 aaKnown RBP16.43■□□□□ 0.22
DDX39A-216ENST00000591275 POM121L1PQ3SYA9 428 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
DDX39A-216ENST00000591275 SERPINB11Q96P15 392 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 CAAP1Q9H8G2 361 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 KIAA1257Q9ULG3 409 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 TPX2Q9ULW0 747 aaKnown RBP16.43■□□□□ 0.22
DDX39A-216ENST00000591275 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 TLR6Q9Y2C9 796 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 COQ4Q9Y3A0 265 aa16.43■□□□□ 0.22
DDX39A-216ENST00000591275 J3QKU1 62 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 MPOP05164 745 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 PDGFRAP16234 1089 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 DAB2P98082 770 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 STAT4Q14765 748 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 TAC4Q86UU9 113 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 CHSY1Q86X52 802 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 CIR1Q86X95 450 aaPredicted RBP16.42■□□□□ 0.22
DDX39A-216ENST00000591275 CACTIN-AS1Q8N1I8 211 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 SLC25A45Q8N413 288 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 FAM149B1Q96BN6 582 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 SLC39A13Q96H72 371 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 MYOCQ99972 504 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 CPNE5Q9HCH3 593 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 UCKL1Q9NWZ5 548 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 SARDHQ9UL12 918 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 PCDHB4Q9Y5E5 795 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 SPTA1P02549 2419 aa16.42■□□□□ 0.22
DDX39A-216ENST00000591275 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-216ENST00000591275 ERVH48-1M5A8F1 160 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 FFAR2O15552 330 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 PLRG1O43660 514 aaKnown RBP16.41■□□□□ 0.22
DDX39A-216ENST00000591275 MAGEC1O60732 1142 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 FBXO21O94952 628 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 HSP90AA1P07900 732 aaKnown RBP16.41■□□□□ 0.22
DDX39A-216ENST00000591275 PAEPP09466 180 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 TACR2P21452 398 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 TBXAS1P24557 533 aaPredicted RBP16.41■□□□□ 0.22
DDX39A-216ENST00000591275 NNMTP40261 264 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 PCBP4P57723 403 aaKnown RBP16.41■□□□□ 0.22
DDX39A-216ENST00000591275 NUCB2P80303 420 aa16.41■□□□□ 0.22
DDX39A-216ENST00000591275 E2F1Q01094 437 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms