RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 RALGAPA1Q6GYQ0 2036 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 KIAA1211LQ6NV74 962 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 SCYL2Q6P3W7 929 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 THADAQ6YHU6 1953 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 TC2NQ8N9U0 490 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 CYB5D2Q8WUJ1 264 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 HMGB4Q8WW32 186 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 FEM1AQ9BSK4 669 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 NHEJ1Q9H9Q4 299 aaPredicted RBP12.24□□□□□ -0.45
LIG3-213ENST00000590630 MPP6Q9NZW5 540 aa12.24□□□□□ -0.45
LIG3-213ENST00000590630 ABCA7Q8IZY2 2146 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 CEP192Q8TEP8 1941 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 PRR23AA6NEV1 266 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 EIF3CLB5ME19 914 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 LRIG2O94898 1065 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 EPHX1P07099 455 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 SRPRAP08240 638 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 GABRG2P18507 467 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 PRKCHP24723 683 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 MZF1P28698 734 aaPredicted RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 L1CAMP32004 1257 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 SIM2Q14190 667 aaPredicted RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 PIGHQ14442 188 aaPredicted RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 USP39Q53GS9 565 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 RNF219Q5W0B1 726 aaPredicted RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 ZNF783Q6ZMS7 281 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 CEP68Q76N32 757 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 TFAP2DQ7Z6R9 452 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 C11orf74Q86VG3 221 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 PSTKQ8IV42 348 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 APCDD1Q8J025 514 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 PGBD3Q8N328 593 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 SUMF1Q8NBK3 374 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 CTNNBL1Q8WYA6 563 aaPredicted RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 TBC1D31Q96DN5 1066 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 ALG14Q96F25 216 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 EIF3CQ99613 913 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 CHP1Q99653 195 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 NUP85Q9BW27 656 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 TPSD1Q9BZJ3 242 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 TRIM7Q9C029 511 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 MUC3BQ9H195 1237 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 FBRSQ9HAH7 460 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 ZNF212Q9UDV6 495 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 VPS28Q9UK41 221 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 RAB23Q9ULC3 237 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 FZD10Q9ULW2 581 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 SMG5Q9UPR3 1016 aaKnown RBP12.23□□□□□ -0.45
LIG3-213ENST00000590630 ERVW-1Q9UQF0 538 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 OR51B4Q9Y5P0 310 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 RAD54BQ9Y620 910 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 DMXL1Q9Y485 3027 aa12.23□□□□□ -0.45
LIG3-213ENST00000590630 NUP205Q92621 2012 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 ILVBLA1L0T0 632 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 FAM72CH0Y354 149 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 PRPSAP2O60256 369 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 GFRA3O60609 400 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 LRCH4O75427 683 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 RHOCP08134 193 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 H2AFZP0C0S5 128 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 RHOQP17081 205 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 NDUFV2P19404 249 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 HTR7P34969 479 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 PCK1P35558 622 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 ETFBP38117 255 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 NNMTP40261 264 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MAPKAPK2P49137 400 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MRE11P49959 708 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
LIG3-213ENST00000590630 SRSF5Q13243 272 aaKnown RBP12.22□□□□□ -0.45
LIG3-213ENST00000590630 CAMK2GQ13555 558 aaPredicted RBP12.22□□□□□ -0.45
LIG3-213ENST00000590630 FAM72AQ5TYM5 149 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 FAM72DQ6L9T8 149 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 RWDD4Q6NW29 188 aaKnown RBP12.22□□□□□ -0.45
LIG3-213ENST00000590630 PRR23BQ6ZRT6 265 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 H2AFVQ71UI9 128 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 ASCL5Q7RTU5 278 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 FAM72BQ86X60 149 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 ARFGAP1Q8N6T3 406 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 NIPA2Q8N8Q9 360 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 OR52K2Q8NGK3 314 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MYO19Q96H55 970 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 SPACA7Q96KW9 195 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MRGPRX3Q96LB0 322 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MRGPRX1Q96LB2 322 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 EPAS1Q99814 870 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 C2orf49Q9BVC5 232 aaPredicted RBP12.22□□□□□ -0.45
LIG3-213ENST00000590630 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 SUN2Q9UH99 717 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 IP6K2Q9UHH9 426 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 LCMT1Q9UIC8 334 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 ANAPC7Q9UJX3 599 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 NEU3Q9UQ49 428 aa12.22□□□□□ -0.45
LIG3-213ENST00000590630 MYO1FO00160 1098 aa12.21□□□□□ -0.45
LIG3-213ENST00000590630 ZNF217O75362 1048 aa12.21□□□□□ -0.45
LIG3-213ENST00000590630 TMEM253P0C7T8 217 aa12.21□□□□□ -0.45
LIG3-213ENST00000590630 C7P10643 843 aa12.21□□□□□ -0.45
LIG3-213ENST00000590630 HLA-EP13747 358 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms