RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 MS4A13Q5J8X5 152 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 ARTNQ5T4W7 220 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 PIK3R6Q5UE93 754 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 DENND1CQ8IV53 801 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 FAM217AQ8IXS0 508 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 PYROXD2Q8N2H3 581 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 KCTD15Q96SI1 283 aaPredicted RBP17.1■□□□□ 0.33
GCDH-213ENST00000590627 OSBPL9Q96SU4 736 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 PRMT1Q99873 361 aaKnown RBP17.1■□□□□ 0.33
GCDH-213ENST00000590627 ZNF670Q9BS34 389 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 OR12D3Q9UGF7 316 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 EFR3BQ9Y2G0 817 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 SH3BP1Q9Y3L3 701 aa17.1■□□□□ 0.33
GCDH-213ENST00000590627 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.1■□□□□ 0.33
GCDH-213ENST00000590627 EPG5Q9HCE0 2579 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 DCDC2BA2VCK2 349 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 SLC30A4O14863 429 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 ATG13O75143 517 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 IRF1P10914 325 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 IL4RP24394 825 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 CDKN2BP42772 138 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 SRSF5Q13243 272 aaKnown RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 AUHQ13825 339 aaKnown RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 DPYSL3Q14195 570 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 KRT81Q14533 505 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 ODF2Q5BJF6 829 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 FAM133BQ5BKY9 247 aaKnown RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 TMEM196Q5HYL7 178 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 ZFYVE27Q5T4F4 411 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 ADGRF1Q5T601 910 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 MANEALQ5VSG8 457 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 NADSYN1Q6IA69 706 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 MFSD7Q6UXD7 560 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 SPOCD1Q6ZMY3 1216 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 PRR23CQ6ZRP0 262 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 ZNF683Q8IZ20 524 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 DDX50Q9BQ39 737 aaKnown RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 MAGEB5Q9BZ81 275 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 PRDM16Q9HAZ2 1276 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 HPS4Q9NQG7 708 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 KLHL11Q9NVR0 708 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 C2orf42Q9NWW7 574 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 TTC7AQ9ULT0 858 aaPredicted RBP17.09■□□□□ 0.33
GCDH-213ENST00000590627 ACACBO00763 2458 aa17.09■□□□□ 0.33
GCDH-213ENST00000590627 IGLV3-10A0A075B6K4 115 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 FAM72CH0Y354 149 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 H3BRJ5 948 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 GFRA2O00451 464 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
GCDH-213ENST00000590627 LRIG2O94898 1065 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 CD48P09326 243 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 HOXC13P31276 330 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 CETN2P41208 172 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
GCDH-213ENST00000590627 TUBB2AQ13885 445 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 C5orf22Q49AR2 442 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 TFDP3Q5H9I0 405 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 PPP6R3Q5H9R7 873 aaPredicted RBP17.08■□□□□ 0.32
GCDH-213ENST00000590627 FAM72AQ5TYM5 149 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 FAM72DQ6L9T8 149 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 CEP68Q76N32 757 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 FAM72BQ86X60 149 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 RASGEF1CQ8N431 466 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 CPXM2Q8N436 756 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 RIN3Q8TB24 985 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 COG1Q8WTW3 980 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 ZNF592Q92610 1267 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 RNF25Q96BH1 459 aaPredicted RBP17.08■□□□□ 0.32
GCDH-213ENST00000590627 PSMB7Q99436 277 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 EPAS1Q99814 870 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 TUBB2BQ9BVA1 445 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 SIK2Q9H0K1 926 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 CWC15Q9P013 229 aaKnown RBP17.08■□□□□ 0.32
GCDH-213ENST00000590627 PPARGC1AQ9UBK2 798 aaKnown RBP17.08■□□□□ 0.32
GCDH-213ENST00000590627 SNX10Q9Y5X0 201 aa17.08■□□□□ 0.32
GCDH-213ENST00000590627 SPAG17Q6Q759 2223 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.07■□□□□ 0.32
GCDH-213ENST00000590627 DRGXA6NNA5 263 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 EEF2KO00418 725 aaKnown RBP17.07■□□□□ 0.32
GCDH-213ENST00000590627 TACR2P21452 398 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 CXCR5P32302 372 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 ARL4AP40617 200 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 ZNF211Q13398 564 aaPredicted RBP17.07■□□□□ 0.32
GCDH-213ENST00000590627 DPYSQ14117 519 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 PDGFRLQ15198 375 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 FSTL4Q6MZW2 842 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 FBXL22Q6P050 247 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 ANKS1BQ7Z6G8 1248 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 C14orf80Q86SX3 495 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 FAM160A2Q8N612 972 aaPredicted RBP17.07■□□□□ 0.32
GCDH-213ENST00000590627 EXOC4Q96A65 974 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 OTUB2Q96DC9 234 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 LOXL4Q96JB6 756 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 CSPG4P5Q96PW8 444 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 CALN1Q9BXU9 219 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 OSBPL8Q9BZF1 889 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 EBF3Q9H4W6 596 aa17.07■□□□□ 0.32
GCDH-213ENST00000590627 RETREG1Q9H6L5 497 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms